Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHH68_RS11190 | Genome accession | NZ_CP150266 |
| Coordinates | 2217852..2218187 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-2841 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2212852..2223187
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH68_RS11170 (MHH68_11170) | gcvT | 2213330..2214427 (-) | 1098 | WP_144462734.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHH68_RS11175 (MHH68_11175) | - | 2214989..2216659 (+) | 1671 | WP_339163088.1 | SNF2-related protein | - |
| MHH68_RS11180 (MHH68_11180) | - | 2216674..2217471 (+) | 798 | WP_058014689.1 | YqhG family protein | - |
| MHH68_RS11185 (MHH68_11185) | - | 2217654..2217818 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MHH68_RS11190 (MHH68_11190) | sinR | 2217852..2218187 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MHH68_RS11195 (MHH68_11195) | - | 2218255..2219055 (-) | 801 | WP_058014688.1 | TasA family protein | - |
| MHH68_RS11200 (MHH68_11200) | - | 2219113..2219685 (-) | 573 | WP_058014687.1 | signal peptidase I | - |
| MHH68_RS11205 (MHH68_11205) | tapA | 2219730..2220257 (-) | 528 | WP_058014686.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHH68_RS11210 (MHH68_11210) | - | 2220524..2220835 (+) | 312 | WP_061410249.1 | YqzG/YhdC family protein | - |
| MHH68_RS11215 (MHH68_11215) | - | 2220869..2221063 (-) | 195 | WP_044140973.1 | YqzE family protein | - |
| MHH68_RS11220 (MHH68_11220) | comGG | 2221123..2221506 (-) | 384 | WP_058014684.1 | competence type IV pilus minor pilin ComGG | - |
| MHH68_RS11225 (MHH68_11225) | comGF | 2221503..2222033 (-) | 531 | WP_280150117.1 | competence type IV pilus minor pilin ComGF | - |
| MHH68_RS11230 (MHH68_11230) | comGE | 2221942..2222259 (-) | 318 | WP_339163096.1 | competence type IV pilus minor pilin ComGE | - |
| MHH68_RS11235 (MHH68_11235) | comGD | 2222243..2222689 (-) | 447 | WP_339163098.1 | competence type IV pilus minor pilin ComGD | - |
| MHH68_RS11240 (MHH68_11240) | comGC | 2222682..2222975 (-) | 294 | WP_003217322.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=968732 MHH68_RS11190 WP_012010555.1 2217852..2218187(+) (sinR) [Bacillus sp. FSL K6-2841]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=968732 MHH68_RS11190 WP_012010555.1 2217852..2218187(+) (sinR) [Bacillus sp. FSL K6-2841]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |