Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHH68_RS10995 Genome accession   NZ_CP150266
Coordinates   2183112..2183915 (-) Length   267 a.a.
NCBI ID   WP_003215740.1    Uniprot ID   A0AB34QSQ5
Organism   Bacillus sp. FSL K6-2841     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2178112..2188915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH68_RS10980 (MHH68_10980) - 2180320..2180556 (+) 237 WP_144462757.1 DUF2627 domain-containing protein -
  MHH68_RS10985 (MHH68_10985) - 2180591..2181328 (-) 738 WP_339163055.1 glycerophosphodiester phosphodiesterase -
  MHH68_RS10990 (MHH68_10990) - 2181554..2182654 (-) 1101 WP_058014715.1 Rap family tetratricopeptide repeat protein -
  MHH68_RS10995 (MHH68_10995) spo0A 2183112..2183915 (-) 804 WP_003215740.1 sporulation transcription factor Spo0A Regulator
  MHH68_RS11000 (MHH68_11000) spoIVB 2184201..2185478 (-) 1278 WP_339163059.1 SpoIVB peptidase -
  MHH68_RS11005 (MHH68_11005) recN 2185677..2187413 (-) 1737 WP_061408509.1 DNA repair protein RecN Machinery gene
  MHH68_RS11010 (MHH68_11010) argR 2187447..2187896 (-) 450 WP_058014712.1 transcriptional regulator ArgR -
  MHH68_RS11015 (MHH68_11015) - 2188056..2188910 (-) 855 WP_106067130.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29946.45 Da        Isoelectric Point: 6.3914

>NTDB_id=968730 MHH68_RS10995 WP_003215740.1 2183112..2183915(-) (spo0A) [Bacillus sp. FSL K6-2841]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNDMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRRNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=968730 MHH68_RS10995 WP_003215740.1 2183112..2183915(-) (spo0A) [Bacillus sp. FSL K6-2841]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGATGGCCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGACATGACCAAACAG
CCAAGTGTGATTATGCTAACGGCGTTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTAGGGGCATCCTATTTCAT
CTTAAAGCCATTTGATATGGAAAACCTAGTCGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCACCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGAAACAAACCTGAACCGAAACGCAGAAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGTGTACCTGCTCATATTAAAGGTTACTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGACAT
CGAGCTTCTCGGAAGCATCACAAAAGTGTTGTATCCAGACATCGCGAAGAAATTTAACACGACCGCGAGCAGGGTCGAAC
GAGCAATTCGTCATGCGATTGAAGTGGCTTGGAGTAGAGGAAACATCGACTCCATTTCCTCACTCTTTGGTTATACAGTC
AGCATGTCTAAAGCAAAACCAACCAATTCTGAATTTATCGCAATGGTGGCTGACCGTCTCCGCTTGGAGCATCGAGCTAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment