Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MHH68_RS06910 Genome accession   NZ_CP150266
Coordinates   1393264..1393845 (+) Length   193 a.a.
NCBI ID   WP_058014107.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2841     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1388264..1398845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH68_RS06880 (MHH68_06880) dapD 1388387..1389097 (+) 711 WP_058014112.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MHH68_RS06885 (MHH68_06885) - 1389179..1390309 (+) 1131 WP_339165666.1 N-acetyldiaminopimelate deacetylase -
  MHH68_RS06890 (MHH68_06890) - 1390360..1390602 (+) 243 WP_003211408.1 YkuS family protein -
  MHH68_RS06895 (MHH68_06895) - 1390632..1391438 (-) 807 WP_058014109.1 mechanosensitive ion channel family protein -
  MHH68_RS06900 (MHH68_06900) ahpA 1391710..1392252 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  MHH68_RS06905 (MHH68_06905) - 1392335..1392793 (+) 459 WP_003211884.1 TlpA disulfide reductase family protein -
  MHH68_RS06910 (MHH68_06910) rok 1393264..1393845 (+) 582 WP_058014107.1 transcriptional regulator Rok Regulator
  MHH68_RS06915 (MHH68_06915) - 1393897..1394814 (-) 918 WP_058014106.1 hypothetical protein -
  MHH68_RS06920 (MHH68_06920) - 1394899..1395480 (+) 582 WP_058014105.1 molybdenum cofactor guanylyltransferase -
  MHH68_RS06925 (MHH68_06925) - 1395510..1396526 (+) 1017 WP_144462146.1 thiazole biosynthesis adenylyltransferase ThiF -
  MHH68_RS06930 (MHH68_06930) glp 1396536..1397813 (+) 1278 WP_260850288.1 gephyrin-like molybdotransferase Glp -
  MHH68_RS06935 (MHH68_06935) mobB 1397795..1398319 (+) 525 WP_180309074.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MHH68_RS06940 (MHH68_06940) - 1398343..1398807 (+) 465 WP_180310807.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21758.71 Da        Isoelectric Point: 9.7309

>NTDB_id=968722 MHH68_RS06910 WP_058014107.1 1393264..1393845(+) (rok) [Bacillus sp. FSL K6-2841]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRAERKTDSLPVLAELAAQEMRSYQP
PAQSQSNSASTLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=968722 MHH68_RS06910 WP_058014107.1 1393264..1393845(+) (rok) [Bacillus sp. FSL K6-2841]
TTGTTTAATGAGAGGGAAGCGTTACGATTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTGCAGAAAGAAAAACGGATTCACTGCCTGTATTAGCTGAACTGGCTGCACAAGAAATGAGAAGCTACCAGCCG
CCTGCACAATCACAATCAAATTCTGCATCAACTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTCGCCCTGGTTCAAAGGCAGCTAAGCTTCGTGAAGCTGCGATTAAAACGTTAA
AGCGTCATAATGCAGCGATTAAAAGCTCTGAACTTCAAAAAGAAATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAAAAGCCATATCGCGGACAGTATATTTTAGAAGGCGA
TATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.053

98.446

0.798

Multiple sequence alignment