Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHH56_RS27960 Genome accession   NZ_CP150265
Coordinates   6369008..6369961 (-) Length   317 a.a.
NCBI ID   WP_076267197.1    Uniprot ID   A0A1R1AKR6
Organism   Paenibacillus sp. FSL K6-3182     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 6364008..6374961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH56_RS27935 (MHH56_27935) fetB 6364602..6365363 (-) 762 WP_076267194.1 iron export ABC transporter permease subunit FetB -
  MHH56_RS27940 (MHH56_27940) - 6365351..6366103 (-) 753 WP_339204895.1 ATP-binding cassette domain-containing protein -
  MHH56_RS27945 (MHH56_27945) - 6366271..6367251 (-) 981 WP_339204896.1 siderophore ABC transporter substrate-binding protein -
  MHH56_RS27950 (MHH56_27950) - 6367322..6368080 (-) 759 WP_339204897.1 ABC transporter ATP-binding protein -
  MHH56_RS27955 (MHH56_27955) - 6368077..6369018 (-) 942 WP_076267196.1 iron chelate uptake ABC transporter family permease subunit -
  MHH56_RS27960 (MHH56_27960) ceuB 6369008..6369961 (-) 954 WP_076267197.1 ABC transporter permease Machinery gene
  MHH56_RS27965 (MHH56_27965) - 6371270..6372979 (-) 1710 WP_339204898.1 ATP-binding cassette domain-containing protein -
  MHH56_RS27970 (MHH56_27970) - 6372966..6374828 (-) 1863 WP_339204900.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34837.96 Da        Isoelectric Point: 9.5452

>NTDB_id=968690 MHH56_RS27960 WP_076267197.1 6369008..6369961(-) (ceuB) [Paenibacillus sp. FSL K6-3182]
MKLWYLFVVLIVLSITSLFIGVKDISPLDLFSLTDEQLQVLTISRFPRLISIIIAGVGMSVTGLIMQQLSRNKFVSPTTG
GTDDSARLGILVALMVFPSASTLEKMLIAFAFALAGTYLFMKILDRLKFKDTIFIPLVGLMFGNIISSVTTFFAYKNDLI
QNISSWLQGSFSLVMSGRYELLYVSLPLLVVAYLYANKFTIAGLGEEFSTNLGMNHKLVVNIGLVIVALVSVIVILTVGT
LPFLGLIIPNIVTLYMGDNLKKNLSHTAVLGAIFVLVCDVLGRLIIFPYEIPIGLTIGVVGSIIFLYLLMRRKAYEA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=968690 MHH56_RS27960 WP_076267197.1 6369008..6369961(-) (ceuB) [Paenibacillus sp. FSL K6-3182]
ATGAAGCTATGGTATCTTTTTGTCGTGCTTATTGTATTATCGATTACTTCTTTATTTATCGGAGTAAAAGACATCTCGCC
GCTGGATCTGTTCAGTCTGACGGATGAGCAGCTTCAGGTTCTCACGATCAGCCGTTTTCCTAGGCTTATCAGTATTATTA
TTGCCGGCGTCGGCATGAGCGTTACAGGTTTGATAATGCAGCAGCTAAGCCGCAACAAATTCGTATCGCCTACGACCGGT
GGAACGGATGATTCCGCTAGACTCGGTATCCTCGTTGCCTTAATGGTGTTCCCATCGGCGAGTACGCTTGAGAAAATGCT
GATCGCGTTTGCTTTTGCACTCGCAGGAACCTATCTGTTCATGAAAATTCTCGATCGTCTGAAATTTAAAGATACGATTT
TCATTCCACTGGTAGGATTGATGTTCGGTAACATCATCAGCTCTGTTACTACATTTTTTGCCTATAAAAATGATCTTATT
CAAAACATCTCATCTTGGCTGCAAGGCAGCTTCTCGCTTGTAATGAGCGGACGTTACGAGCTGCTGTATGTAAGCCTGCC
GCTGCTCGTAGTAGCTTATCTCTACGCGAACAAGTTTACCATTGCTGGTCTTGGCGAAGAGTTTTCAACCAATTTGGGAA
TGAATCATAAGCTTGTCGTTAACATCGGGCTTGTAATTGTAGCTCTTGTATCGGTTATCGTCATTTTGACTGTCGGTACG
CTGCCTTTTCTTGGCCTTATTATTCCGAATATCGTGACGCTGTATATGGGCGACAATTTGAAAAAAAACCTGTCGCACAC
GGCGGTGCTTGGAGCCATATTCGTACTGGTGTGCGATGTGCTTGGCCGCCTAATTATTTTTCCGTATGAAATTCCAATCG
GACTCACGATCGGCGTTGTCGGAAGCATTATTTTTCTTTACTTGTTGATGAGGAGAAAGGCATATGAAGCTTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1R1AKR6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

99.685

0.527

Multiple sequence alignment