Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHH88_RS20400 Genome accession   NZ_CP150264
Coordinates   4193935..4194885 (-) Length   316 a.a.
NCBI ID   WP_069508862.1    Uniprot ID   A0A2S5CVJ9
Organism   Lysinibacillus sp. FSL K6-3209     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4188935..4199885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH88_RS20375 (MHH88_20375) - 4189991..4190635 (+) 645 WP_103977845.1 hypothetical protein -
  MHH88_RS20380 (MHH88_20380) - 4190848..4191162 (-) 315 WP_024361366.1 antibiotic biosynthesis monooxygenase -
  MHH88_RS20385 (MHH88_20385) - 4191164..4192171 (-) 1008 WP_069508868.1 siderophore ABC transporter substrate-binding protein -
  MHH88_RS20390 (MHH88_20390) - 4192231..4192992 (-) 762 WP_069508866.1 ABC transporter ATP-binding protein -
  MHH88_RS20395 (MHH88_20395) - 4192989..4193942 (-) 954 WP_069508864.1 iron chelate uptake ABC transporter family permease subunit -
  MHH88_RS20400 (MHH88_20400) ceuB 4193935..4194885 (-) 951 WP_069508862.1 ABC transporter permease Machinery gene
  MHH88_RS20405 (MHH88_20405) - 4195174..4196229 (-) 1056 WP_339260322.1 hypothetical protein -
  MHH88_RS20410 (MHH88_20410) menC 4196294..4197403 (-) 1110 WP_339260324.1 o-succinylbenzoate synthase -
  MHH88_RS20415 (MHH88_20415) - 4197425..4198249 (-) 825 WP_339260325.1 GNAT family N-acetyltransferase -
  MHH88_RS20420 (MHH88_20420) - 4198265..4199392 (-) 1128 WP_339260327.1 M20 peptidase aminoacylase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34672.92 Da        Isoelectric Point: 10.1796

>NTDB_id=968659 MHH88_RS20400 WP_069508862.1 4193935..4194885(-) (ceuB) [Lysinibacillus sp. FSL K6-3209]
MKIRYLLTATVVLSIVSLFIGVVNIKPSDLLDFGSEETRLFIISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATKLGVLISMMLFTNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMFGNILSSITTFFAYKADII
QNITAWLQGDFSLIMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALVTTTVVLTVGV
IPFLGLIIPNIISLFKGDNLAKTLPHTALLGMSFLLLCDILGRVLIFPYEIPISMTVGVIGSAIFLFMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=968659 MHH88_RS20400 WP_069508862.1 4193935..4194885(-) (ceuB) [Lysinibacillus sp. FSL K6-3209]
ATGAAAATAAGATATCTTTTAACAGCAACTGTTGTGTTGTCTATTGTGTCGCTATTCATTGGTGTAGTAAATATTAAGCC
AAGTGACTTATTAGACTTCGGTTCAGAAGAAACTAGACTATTTATTATTAGTCGTGTACCAAGACTTGTAGCAATTTTGC
TAGCAGGTGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAGTTCGTGTCACCAACTACAGCA
GGAACTTTAGATGCTACGAAATTAGGCGTCCTAATTTCAATGATGTTATTTACAAATGTCACGTACTTCCAAAAAATTTC
CTTCGCTTTCATATTTGCTTTAGCCGGCACATTATTGTTTATGCAAATATTAAATCGAATAAAGTTTAAAGATGCGATTT
TTATACCGCTTATTGGCTTAATGTTCGGAAATATTCTTTCGTCGATTACAACATTCTTTGCGTATAAGGCAGATATAATC
CAAAACATTACTGCATGGTTACAAGGAGATTTCTCTTTAATAATGAAAGGTCGTTATGAGCTTTTATACATAAGTGTACC
TGTTCTAATTTTAGCTTACATTTATGCGAATCGTTTCACAGTGGCTGGCATGGGTGAAGATTTTGCAAAAAATCTTGGTC
TTTCCTATAAATTCGTTGTGAATTTAGGTCTAGTGTTAGTAGCACTCGTAACAACTACAGTGGTATTAACTGTTGGTGTG
ATTCCTTTCCTTGGATTAATTATTCCAAATATCATATCGCTATTCAAAGGGGATAACCTTGCAAAGACATTACCACATAC
AGCATTACTCGGAATGTCATTCCTATTATTATGTGATATTTTAGGACGCGTCTTGATTTTCCCTTATGAAATTCCGATTA
GTATGACGGTCGGCGTCATCGGAAGTGCCATCTTCCTATTTATGTTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S5CVJ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment