Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   ACK2V1_RS07560 Genome accession   NZ_CP176715
Coordinates   1498227..1499378 (-) Length   383 a.a.
NCBI ID   WP_000020347.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GTVSS-007     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1493227..1504378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2V1_RS07540 (ACK2V1_07540) - 1493623..1494420 (-) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -
  ACK2V1_RS07545 (ACK2V1_07545) - 1494594..1494809 (+) 216 WP_000026308.1 hypothetical protein -
  ACK2V1_RS07550 (ACK2V1_07550) rny 1495106..1496665 (-) 1560 WP_001050913.1 ribonuclease Y -
  ACK2V1_RS07555 (ACK2V1_07555) recA 1497019..1498062 (-) 1044 WP_000368166.1 recombinase RecA Machinery gene
  ACK2V1_RS07560 (ACK2V1_07560) cinA 1498227..1499378 (-) 1152 WP_000020347.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  ACK2V1_RS07565 (ACK2V1_07565) pgsA 1499602..1500180 (-) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  ACK2V1_RS07570 (ACK2V1_07570) - 1500214..1500606 (-) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  ACK2V1_RS07575 (ACK2V1_07575) - 1500625..1501452 (-) 828 WP_000214890.1 YmfK family protein -
  ACK2V1_RS07580 (ACK2V1_07580) ymfI 1501557..1502261 (-) 705 WP_000646228.1 elongation factor P 5-aminopentanone reductase -
  ACK2V1_RS07585 (ACK2V1_07585) yfmH 1502261..1503547 (-) 1287 WP_000664775.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43265.58 Da        Isoelectric Point: 6.1914

>NTDB_id=968635 ACK2V1_RS07560 WP_000020347.1 1498227..1499378(-) (cinA) [Staphylococcus aureus strain GTVSS-007]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYVLIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=968635 ACK2V1_RS07560 WP_000020347.1 1498227..1499378(-) (cinA) [Staphylococcus aureus strain GTVSS-007]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGTGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.389

100

0.433