Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MKX80_RS09935 Genome accession   NZ_CP150260
Coordinates   1953349..1953825 (+) Length   158 a.a.
NCBI ID   WP_268343201.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0972     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1948349..1958825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX80_RS09900 (MKX80_09900) - 1948376..1948581 (+) 206 Protein_1903 DUF3986 family protein -
  MKX80_RS09905 (MKX80_09905) - 1948853..1949281 (+) 429 WP_154998836.1 HIT domain-containing protein -
  MKX80_RS09910 (MKX80_09910) - 1950036..1951013 (+) 978 WP_154998857.1 alpha/beta hydrolase family protein -
  MKX80_RS09915 (MKX80_09915) - 1951066..1951212 (+) 147 WP_268314452.1 hypothetical protein -
  MKX80_RS09920 (MKX80_09920) - 1951398..1951994 (+) 597 WP_154998840.1 class I SAM-dependent methyltransferase -
  MKX80_RS09925 (MKX80_09925) - 1952100..1952579 (+) 480 WP_154998842.1 DUF4944 domain-containing protein -
  MKX80_RS09930 (MKX80_09930) - 1952613..1953212 (+) 600 WP_268343200.1 GNAT family N-acetyltransferase -
  MKX80_RS09935 (MKX80_09935) rok 1953349..1953825 (+) 477 WP_268343201.1 hypothetical protein Regulator
  MKX80_RS09940 (MKX80_09940) - 1954513..1955133 (-) 621 WP_154995179.1 hypothetical protein -
  MKX80_RS09945 (MKX80_09945) - 1955843..1956427 (+) 585 WP_154995177.1 TetR family transcriptional regulator -
  MKX80_RS09950 (MKX80_09950) - 1956508..1956840 (+) 333 WP_076791210.1 multidrug efflux SMR transporter -
  MKX80_RS09955 (MKX80_09955) - 1956843..1957160 (+) 318 WP_154995191.1 multidrug efflux SMR transporter -
  MKX80_RS09960 (MKX80_09960) speG 1957189..1957731 (+) 543 WP_154995175.1 spermidine N1-acetyltransferase -
  MKX80_RS09965 (MKX80_09965) - 1957770..1958126 (-) 357 WP_268310469.1 YxeA family protein -
  MKX80_RS09970 (MKX80_09970) - 1958310..1958750 (+) 441 WP_154995171.1 hypothetical protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18277.15 Da        Isoelectric Point: 10.5408

>NTDB_id=968455 MKX80_RS09935 WP_268343201.1 1953349..1953825(+) (rok) [Bacillus sp. FSL K6-0972]
MFNEREALRLRLEQLGDAEIQVMRELRKERQDIYSKLRELDRESDPAINKKSSLIDLASAAAQELKQSQHAADKHPPIKT
PSHTIFQSKTTIQREAALNILSRHEEGLRGIKLKSEIEKETGFPIKNMTTFMKSLMKHRPEIKKPARGHYILQKPKSL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=968455 MKX80_RS09935 WP_268343201.1 1953349..1953825(+) (rok) [Bacillus sp. FSL K6-0972]
ATGTTCAACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATTCAGGTGATGCGGGAATTGCG
AAAAGAACGACAGGACATTTATTCGAAGCTGCGTGAATTGGATCGGGAGAGTGATCCTGCAATTAACAAAAAATCTTCAT
TAATCGACTTGGCAAGTGCTGCCGCACAGGAATTAAAACAATCCCAACATGCCGCTGACAAACATCCGCCCATCAAGACT
CCATCTCATACTATTTTCCAATCAAAAACAACGATACAGCGTGAGGCTGCCTTAAACATTTTAAGCCGCCATGAAGAAGG
CTTGAGGGGTATTAAGCTTAAAAGTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAATATGACGACATTTATGAAGA
GCTTGATGAAACATCGTCCAGAAATTAAAAAACCTGCCCGCGGCCATTATATTTTGCAAAAACCCAAAAGCCTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

45.556

100

0.519

Multiple sequence alignment