Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MKX80_RS09730 Genome accession   NZ_CP150260
Coordinates   1912643..1912846 (+) Length   67 a.a.
NCBI ID   WP_154998779.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0972     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1907643..1917846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX80_RS09695 (MKX80_09695) - 1907672..1908139 (+) 468 WP_182070650.1 Fur family transcriptional regulator -
  MKX80_RS09700 (MKX80_09700) - 1908252..1908917 (+) 666 WP_182070649.1 GntR family transcriptional regulator -
  MKX80_RS09705 (MKX80_09705) - 1908925..1909893 (+) 969 WP_154998771.1 multidrug resistance efflux transporter family protein -
  MKX80_RS09710 (MKX80_09710) - 1909948..1910709 (-) 762 WP_268310872.1 N-acetylmuramoyl-L-alanine amidase -
  MKX80_RS09720 (MKX80_09720) - 1911223..1911708 (-) 486 WP_154998775.1 DMT family transporter -
  MKX80_RS09725 (MKX80_09725) - 1911730..1912182 (-) 453 WP_154998777.1 DMT family transporter -
  MKX80_RS09730 (MKX80_09730) rok 1912643..1912846 (+) 204 WP_154998779.1 hypothetical protein Regulator
  MKX80_RS09735 (MKX80_09735) - 1913064..1913687 (+) 624 WP_154998781.1 TetR/AcrR family transcriptional regulator -
  MKX80_RS09740 (MKX80_09740) - 1913690..1914076 (+) 387 WP_154998783.1 OsmC family protein -
  MKX80_RS09745 (MKX80_09745) - 1914109..1915458 (+) 1350 WP_182070645.1 cytosine permease -
  MKX80_RS09750 (MKX80_09750) - 1915483..1917588 (+) 2106 WP_268335304.1 hydantoinase/oxoprolinase family protein -

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 8072.24 Da        Isoelectric Point: 10.2672

>NTDB_id=968454 MKX80_RS09730 WP_154998779.1 1912643..1912846(+) (rok) [Bacillus sp. FSL K6-0972]
MFNEREALRLRLEQLNNAEIQAIRELQNERKDIYSRLRELDRQKVSSSHHKKTLLQLVDETANLLKK

Nucleotide


Download         Length: 204 bp        

>NTDB_id=968454 MKX80_RS09730 WP_154998779.1 1912643..1912846(+) (rok) [Bacillus sp. FSL K6-0972]
GTGTTCAACGAAAGAGAGGCGCTCCGATTAAGACTGGAACAACTGAACAATGCCGAGATTCAAGCCATACGCGAACTCCA
AAATGAGCGGAAAGACATTTATTCCAGACTGCGGGAATTAGATCGTCAAAAAGTTTCATCATCACATCATAAAAAAACTT
TATTACAATTAGTCGATGAAACTGCAAATCTCTTGAAAAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

70.213

70.149

0.493

Multiple sequence alignment