Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MKX80_RS07920 Genome accession   NZ_CP150260
Coordinates   1559385..1559846 (-) Length   153 a.a.
NCBI ID   WP_076794238.1    Uniprot ID   A0AA90IVN0
Organism   Bacillus sp. FSL K6-0972     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1554385..1564846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX80_RS07895 (MKX80_07895) - 1554733..1555902 (-) 1170 WP_020451186.1 aminotransferase A -
  MKX80_RS07900 (MKX80_07900) - 1556094..1556252 (-) 159 WP_176275789.1 hypothetical protein -
  MKX80_RS07905 (MKX80_07905) - 1556424..1556948 (+) 525 WP_154995960.1 RDD family protein -
  MKX80_RS07910 (MKX80_07910) - 1557045..1558364 (+) 1320 WP_154995958.1 MFS transporter -
  MKX80_RS07915 (MKX80_07915) - 1558438..1559355 (+) 918 WP_154995956.1 chemotaxis protein -
  MKX80_RS07920 (MKX80_07920) kre 1559385..1559846 (-) 462 WP_076794238.1 YkyB family protein Regulator
  MKX80_RS07925 (MKX80_07925) - 1559988..1561289 (-) 1302 WP_154995954.1 MFS transporter -
  MKX80_RS07930 (MKX80_07930) - 1561378..1561875 (-) 498 WP_154995952.1 L,D-transpeptidase family protein -
  MKX80_RS07935 (MKX80_07935) - 1562053..1562910 (-) 858 WP_154995950.1 metallophosphoesterase -
  MKX80_RS07940 (MKX80_07940) fadH 1563056..1563820 (+) 765 WP_268343391.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17614.42 Da        Isoelectric Point: 10.6730

>NTDB_id=968447 MKX80_RS07920 WP_076794238.1 1559385..1559846(-) (kre) [Bacillus sp. FSL K6-0972]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPATKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=968447 MKX80_RS07920 WP_076794238.1 1559385..1559846(-) (kre) [Bacillus sp. FSL K6-0972]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAATCGCCA
TGCGAAAACCGCGACTAATCCCAAATACCTGTATCTTCTAAAAAAGAAAGCTTTGCAAAAGCTGCTCAATGAAGGAAAAG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCTGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATAAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCAGCCACAAAACCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTCTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83

Multiple sequence alignment