Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK   Type   Regulator
Locus tag   MKX80_RS05935 Genome accession   NZ_CP150260
Coordinates   1174285..1174863 (+) Length   192 a.a.
NCBI ID   WP_154999609.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0972     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1169285..1179863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX80_RS05915 (MKX80_05915) - 1169788..1171077 (-) 1290 WP_268342815.1 globin-coupled sensor protein -
  MKX80_RS05920 (MKX80_05920) - 1171184..1172713 (-) 1530 WP_154999605.1 FAD-dependent oxidoreductase -
  MKX80_RS05925 (MKX80_05925) - 1172854..1173711 (+) 858 WP_043927304.1 SDR family oxidoreductase -
  MKX80_RS05930 (MKX80_05930) - 1173779..1174012 (-) 234 WP_003180353.1 IDEAL domain-containing protein -
  MKX80_RS05935 (MKX80_05935) comK 1174285..1174863 (+) 579 WP_154999609.1 competence protein ComK Regulator
  MKX80_RS05940 (MKX80_05940) - 1174857..1175222 (-) 366 WP_152847534.1 hypothetical protein -
  MKX80_RS05945 (MKX80_05945) - 1175429..1176040 (+) 612 WP_043927307.1 TVP38/TMEM64 family protein -
  MKX80_RS05950 (MKX80_05950) lepB 1176053..1176571 (+) 519 WP_043927308.1 signal peptidase I -
  MKX80_RS05955 (MKX80_05955) - 1176733..1178508 (-) 1776 WP_326849683.1 S8 family serine peptidase -

Sequence


Protein


Download         Length: 192 a.a.        Molecular weight: 22362.59 Da        Isoelectric Point: 7.8088

>NTDB_id=968435 MKX80_RS05935 WP_154999609.1 1174285..1174863(+) (comK) [Bacillus sp. FSL K6-0972]
MSTEDMTKDTYEVNGSTMAVLPLGEGEKPASKILETERTFLVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSITSFENQVYRTAWLRTKFIDRIEGN
AMQKKQEFMLYPKEDRNELIYEFILRELKKRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=968435 MKX80_RS05935 WP_154999609.1 1174285..1174863(+) (comK) [Bacillus sp. FSL K6-0972]
ATGAGCACAGAGGATATGACAAAAGATACGTATGAAGTAAACGGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTTGAGACCGAGAGGACTTTCCTCGTCAATATGAAGCCGTTTCAGATCATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGAAGAAAAGCGGGCACATATGAAGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAACATTTTTCTTTTTCCTACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACCTTTGTCAACGGGGAAACGCTGGAGCTGCCTG
TATCCATCACATCTTTCGAAAACCAGGTATACCGAACGGCATGGCTGAGAACAAAATTTATCGACCGGATTGAAGGAAAC
GCCATGCAGAAGAAACAGGAATTTATGCTCTATCCGAAAGAAGACCGGAATGAGCTGATATACGAATTCATCCTCAGGGA
GCTGAAAAAGCGCTATTGA

Domains


Predicted by InterproScan.

(9-157)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

68.617

97.917

0.672


Multiple sequence alignment