Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | MKX80_RS00265 | Genome accession | NZ_CP150260 |
| Coordinates | 48737..49027 (-) | Length | 96 a.a. |
| NCBI ID | WP_085959887.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-0972 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 43737..54027
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKX80_RS00225 (MKX80_00225) | - | 43757..44086 (+) | 330 | WP_003178156.1 | cyclic-di-AMP receptor | - |
| MKX80_RS00230 (MKX80_00230) | - | 44098..44538 (+) | 441 | WP_003178158.1 | YaaR family protein | - |
| MKX80_RS00235 (MKX80_00235) | holB | 44550..45539 (+) | 990 | WP_020449793.1 | DNA polymerase III subunit delta' | - |
| MKX80_RS00240 (MKX80_00240) | - | 45542..46369 (+) | 828 | WP_020449794.1 | stage 0 sporulation family protein | - |
| MKX80_RS00245 (MKX80_00245) | yabA | 46384..46746 (+) | 363 | WP_154999878.1 | DNA replication initiation control protein YabA | - |
| MKX80_RS00250 (MKX80_00250) | - | 46811..47554 (+) | 744 | WP_020449796.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| MKX80_RS00255 (MKX80_00255) | - | 47541..47834 (+) | 294 | WP_043928911.1 | GIY-YIG nuclease family protein | - |
| MKX80_RS00260 (MKX80_00260) | rsmI | 47809..48687 (+) | 879 | WP_154999881.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MKX80_RS00265 (MKX80_00265) | abrB | 48737..49027 (-) | 291 | WP_085959887.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| MKX80_RS00270 (MKX80_00270) | metG | 49535..51523 (+) | 1989 | WP_268299912.1 | methionine--tRNA ligase | - |
| MKX80_RS00275 (MKX80_00275) | - | 51608..52375 (+) | 768 | WP_216931318.1 | TatD family hydrolase | - |
| MKX80_RS00280 (MKX80_00280) | - | 52492..53817 (+) | 1326 | WP_154999875.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10680.43 Da Isoelectric Point: 5.1848
>NTDB_id=968423 MKX80_RS00265 WP_085959887.1 48737..49027(-) (abrB) [Bacillus sp. FSL K6-0972]
MNMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSPEG
AEQIINEIQAQLQSQK
MNMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSPEG
AEQIINEIQAQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=968423 MKX80_RS00265 WP_085959887.1 48737..49027(-) (abrB) [Bacillus sp. FSL K6-0972]
ATGAATATGAAATCTACAGGTATTGTACGTAAAGTTGATGAGCTAGGACGCGTGGTGATTCCGATCGAACTTCGCCGTAC
GCTTGGAATCGCAGAAAAAGACGCTCTTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTTTCTGATGACAACCTTAAACTCGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGC
GCTGAGCAAATCATTAACGAAATTCAAGCACAACTTCAATCTCAAAAATAA
ATGAATATGAAATCTACAGGTATTGTACGTAAAGTTGATGAGCTAGGACGCGTGGTGATTCCGATCGAACTTCGCCGTAC
GCTTGGAATCGCAGAAAAAGACGCTCTTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAAGTTTCTGATGACAACCTTAAACTCGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGC
GCTGAGCAAATCATTAACGAAATTCAAGCACAACTTCAATCTCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |