Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   MKY32_RS19535 Genome accession   NZ_CP150259
Coordinates   3702207..3702941 (-) Length   244 a.a.
NCBI ID   WP_021837755.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0998     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3697207..3707941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY32_RS19500 (MKY32_19500) fliW 3697358..3697789 (-) 432 WP_011198351.1 flagellar assembly protein FliW -
  MKY32_RS19505 (MKY32_19505) - 3697811..3698377 (-) 567 WP_003185702.1 DUF6470 family protein -
  MKY32_RS19510 (MKY32_19510) flgL 3698427..3699338 (-) 912 WP_003185705.1 flagellar hook-associated protein FlgL -
  MKY32_RS19515 (MKY32_19515) flgK 3699349..3700872 (-) 1524 WP_003185709.1 flagellar hook-associated protein FlgK -
  MKY32_RS19520 (MKY32_19520) - 3700888..3701364 (-) 477 WP_003185711.1 flagellar protein FlgN -
  MKY32_RS19525 (MKY32_19525) flgM 3701383..3701649 (-) 267 WP_003185713.1 flagellar biosynthesis anti-sigma factor FlgM -
  MKY32_RS19530 (MKY32_19530) - 3701729..3702148 (-) 420 WP_003185715.1 TIGR03826 family flagellar region protein -
  MKY32_RS19535 (MKY32_19535) comFC 3702207..3702941 (-) 735 WP_021837755.1 amidophosphoribosyltransferase Machinery gene
  MKY32_RS19540 (MKY32_19540) - 3702898..3703182 (-) 285 WP_003185718.1 competence protein ComFB -
  MKY32_RS19545 (MKY32_19545) comFA 3703237..3704631 (-) 1395 WP_003185720.1 DEAD/DEAH box helicase Machinery gene
  MKY32_RS19550 (MKY32_19550) - 3704753..3705595 (-) 843 WP_003185726.1 DegV family protein -
  MKY32_RS19555 (MKY32_19555) degU 3705715..3706404 (-) 690 WP_003185730.1 two-component system response regulator DegU Regulator
  MKY32_RS19560 (MKY32_19560) degS 3706486..3707643 (-) 1158 WP_003185733.1 histidine kinase Regulator

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27845.23 Da        Isoelectric Point: 9.4827

>NTDB_id=968410 MKY32_RS19535 WP_021837755.1 3702207..3702941(-) (comFC) [Bacillus sp. FSL K6-0998]
MKTRFAQAIEEGGNKLNCLICAAPLLHSFSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide


Download         Length: 735 bp        

>NTDB_id=968410 MKY32_RS19535 WP_021837755.1 3702207..3702941(-) (comFC) [Bacillus sp. FSL K6-0998]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTTTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAATACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACGACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

Double zinc ribbon domain (DZR_2)

(17-76)

Phosphoribosyl transferase domain (Pribosyltran)

(151-242)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Bacillus subtilis subsp. subtilis str. 168

52.321

97.131

0.508

Multiple sequence alignment