Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MKY32_RS08100 Genome accession   NZ_CP150259
Coordinates   1575257..1575838 (+) Length   193 a.a.
NCBI ID   WP_059260800.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0998     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1570257..1580838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY32_RS08070 (MKY32_08070) - 1570560..1571015 (+) 456 WP_009328585.1 flavodoxin -
  MKY32_RS08075 (MKY32_08075) dapD 1571121..1571831 (+) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MKY32_RS08080 (MKY32_08080) - 1571900..1573024 (+) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  MKY32_RS08085 (MKY32_08085) - 1573087..1573332 (+) 246 WP_003181323.1 YkuS family protein -
  MKY32_RS08090 (MKY32_08090) ahpA 1573627..1574169 (+) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  MKY32_RS08095 (MKY32_08095) - 1574251..1574709 (+) 459 WP_003181327.1 redoxin domain-containing protein -
  MKY32_RS08100 (MKY32_08100) rok 1575257..1575838 (+) 582 WP_059260800.1 transcriptional regulator Rok Regulator
  MKY32_RS08105 (MKY32_08105) - 1575984..1576940 (-) 957 WP_009328583.1 hypothetical protein -
  MKY32_RS08110 (MKY32_08110) - 1577093..1577680 (+) 588 WP_003181331.1 molybdenum cofactor guanylyltransferase -
  MKY32_RS08115 (MKY32_08115) - 1577786..1578799 (+) 1014 WP_011197943.1 molybdopterin-synthase adenylyltransferase MoeB -
  MKY32_RS08120 (MKY32_08120) glp 1578819..1580111 (+) 1293 WP_003181335.1 gephyrin-like molybdotransferase Glp -
  MKY32_RS08125 (MKY32_08125) mobB 1580078..1580605 (+) 528 WP_003181336.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 22281.23 Da        Isoelectric Point: 9.9960

>NTDB_id=968374 MKY32_RS08100 WP_059260800.1 1575257..1575838(+) (rok) [Bacillus sp. FSL K6-0998]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
PQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTT
FMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 582 bp        

>NTDB_id=968374 MKY32_RS08100 WP_059260800.1 1575257..1575838(+) (rok) [Bacillus sp. FSL K6-0998]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAACGAGGCTGAAGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAACATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACTGAATCTCTCCCTGTTTTAGCTGAATTGGCTGCACAGGAGATGAAGAGCTACCAGCAACAGCAG
CCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGGAACGAC
AAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAATTGCGTGAAGCGGCGATTAAAACATTAAAACGCC
ATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATGACAACC
TTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGAGATTTC
TACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

84.043

97.409

0.819

Multiple sequence alignment