Detailed information NTG0968342

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: MKX38_RS19160
• Genome accession: NZ_CP150258
• Coordinates: 3705420..3706565 (+)
• Length: 381 a.a.
• NCBI ID: WP_017696253.1
• Uniprot ID: A0A0C3JF17
• Organism: Bacillus sp. FSL M8-0025
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3700420..3711565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKX38_RS19140 (MKX38_19140)	-	3700436..3701716 (+)	1281	WP_032722698.1	pitrilysin family protein	-
MKX38_RS19145 (MKX38_19145)	albG	3701713..3702414 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
MKX38_RS19150 (MKX38_19150)	-	3702420..3703796 (-)	1377	WP_339188048.1	YncE family protein	-
MKX38_RS19155 (MKX38_19155)	-	3703835..3705190 (-)	1356	WP_339188051.1	YncE family protein	-
MKX38_RS19160 (MKX38_19160)	rapF	3705420..3706565 (+)	1146	WP_017696253.1	tetratricopeptide repeat protein	Regulator
MKX38_RS19165 (MKX38_19165)	-	3706549..3706668 (+)	120	WP_014665774.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
MKX38_RS19170 (MKX38_19170)	-	3706768..3707240 (+)	473	Protein_3716	YbaK/EbsC family protein	-
MKX38_RS19175 (MKX38_19175)	speB	3707271..3708143 (-)	873	WP_003227545.1	agmatinase	-
MKX38_RS19180 (MKX38_19180)	speE	3708204..3709034 (-)	831	WP_003227543.1	spermidine synthase	-
MKX38_RS19185 (MKX38_19185)	-	3709236..3711311 (+)	2076	WP_033883392.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45593.24 Da
• Isoelectric Point: 5.0684

>NTDB_id=968342 MKX38_RS19160 WP_017696253.1 3705420..3706565(+) (rapF) [Bacillus sp. FSL M8-0025]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYVLAIQFFKKAESKLVFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYSEQTTYDIRMIQCQSLFGANFLDLKQYEKAIAHFQKAFTLAKTEQQPQLMGRTLYNIALCKQNQNSFES
AIEYVKKSIQVFEGSKMLPSLPQAFFLITQIYFKLGKIDNACEYHKKGKEYSAAAGDTVYLTEFEFLESLYLSGPDEERI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASHYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=968342 MKX38_RS19160 WP_017696253.1 3705420..3706565(+) (rapF) [Bacillus sp. FSL M8-0025]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCGCCGTGAATATGTATTAGCCATTCAATTCTTTAAAAAAGCTGAGAGCAAGCTGGTTTTTG
TCAAAGATAAAATCGATAAAGCTGAATTCTTTTTCAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTCTCC
ATGGACTATGCACGTCAAGCATTCGAAATATACAGTGAACAGACTACATATGATATCAGAATGATTCAATGCCAGTCCTT
ATTCGGAGCCAACTTTTTGGATTTAAAACAATACGAAAAAGCAATTGCCCATTTTCAAAAAGCCTTTACACTTGCAAAAA
CAGAGCAGCAGCCCCAATTAATGGGAAGAACACTTTATAACATAGCACTCTGCAAGCAAAACCAAAACAGTTTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCAAGTATTTGAAGGATCTAAAATGCTTCCTTCATTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATTGATAACGCCTGTGAATATCATAAAAAAGGAAAAGAGTATTCTGCAG
CTGCGGGAGATACCGTGTATCTAACGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCGGATGAGGAACGGATA
GAAAAATGTTTTGTTTTTCTTGAAAGTAAAATGATGTATGCAGATATTGAGGACTTCGCACTTGATGTTGCTAAATATTA
TCATCAACAGGAAAATTACAAAAAAGCATCTCATTACTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (263-290)

• Tetratricopeptide repeat (TPR_12) (189-253)

3D structure

• AlphaFold DB: A0A0C3JF17

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	80.052	100	0.801
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57