Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   MKX38_RS06160 Genome accession   NZ_CP150258
Coordinates   1190191..1191342 (+) Length   383 a.a.
NCBI ID   WP_339188965.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0025     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1185191..1196342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX38_RS06125 (MKX38_06125) - 1185863..1187080 (+) 1218 WP_224588911.1 MFS transporter -
  MKX38_RS06130 (MKX38_06130) - 1187244..1187822 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  MKX38_RS06135 (MKX38_06135) spx 1188003..1188398 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  MKX38_RS06140 (MKX38_06140) - 1188441..1189097 (-) 657 WP_003232944.1 TerC family protein -
  MKX38_RS06145 (MKX38_06145) - 1189267..1189407 (+) 141 WP_119122854.1 hypothetical protein -
  MKX38_RS06150 (MKX38_06150) mecA 1189374..1190030 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  MKX38_RS06155 (MKX38_06155) - 1190025..1190147 (-) 123 WP_021479547.1 hypothetical protein -
  MKX38_RS06160 (MKX38_06160) coiA 1190191..1191342 (+) 1152 WP_339188965.1 competence protein CoiA Machinery gene
  MKX38_RS06165 (MKX38_06165) pepF 1191572..1193401 (+) 1830 WP_167408054.1 oligoendopeptidase F -
  MKX38_RS06170 (MKX38_06170) - 1193439..1193606 (-) 168 WP_003244944.1 hypothetical protein -
  MKX38_RS06175 (MKX38_06175) spxH 1193920..1194819 (-) 900 WP_024573348.1 protease adaptor protein SpxH -
  MKX38_RS06180 (MKX38_06180) - 1194816..1195214 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  MKX38_RS06185 (MKX38_06185) cwlQ 1195469..1196203 (-) 735 WP_250620407.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44782.88 Da        Isoelectric Point: 9.9419

>NTDB_id=968294 MKX38_RS06160 WP_339188965.1 1190191..1191342(+) (coiA) [Bacillus sp. FSL M8-0025]
MFSAVTEDGQMFHLLGAQQNQKLKQRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWHFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=968294 MKX38_RS06160 WP_339188965.1 1190191..1191342(+) (coiA) [Bacillus sp. FSL M8-0025]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCAGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAATCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCATTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAATTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGTGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

97.389

0.961


Multiple sequence alignment