Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   MKX38_RS06035 Genome accession   NZ_CP150258
Coordinates   1166937..1167890 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus sp. FSL M8-0025     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1161937..1172890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX38_RS06010 (MKX38_06010) argF 1163768..1164727 (+) 960 WP_032721338.1 ornithine carbamoyltransferase -
  MKX38_RS06015 (MKX38_06015) - 1164813..1164992 (+) 180 WP_003245356.1 YjzC family protein -
  MKX38_RS06020 (MKX38_06020) - 1165038..1165223 (-) 186 WP_029317607.1 DUF2929 domain-containing protein -
  MKX38_RS06025 (MKX38_06025) - 1165473..1166207 (+) 735 WP_032721340.1 hypothetical protein -
  MKX38_RS06030 (MKX38_06030) - 1166289..1166846 (+) 558 WP_014479435.1 hypothetical protein -
  MKX38_RS06035 (MKX38_06035) med 1166937..1167890 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  MKX38_RS06040 (MKX38_06040) comZ 1167905..1168096 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  MKX38_RS06045 (MKX38_06045) yjzB 1168126..1168365 (-) 240 WP_003232972.1 spore coat protein YjzB -
  MKX38_RS06050 (MKX38_06050) fabH 1168530..1169468 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  MKX38_RS06055 (MKX38_06055) fabF 1169491..1170732 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  MKX38_RS06060 (MKX38_06060) - 1170808..1171593 (+) 786 WP_339188961.1 DUF2268 domain-containing protein -
  MKX38_RS06065 (MKX38_06065) appD 1171785..1172771 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=968289 MKX38_RS06035 WP_014476425.1 1166937..1167890(+) (med) [Bacillus sp. FSL M8-0025]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=968289 MKX38_RS06035 WP_014476425.1 1166937..1167890(+) (med) [Bacillus sp. FSL M8-0025]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGTCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997


Multiple sequence alignment