Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MKY56_RS07980 Genome accession   NZ_CP150257
Coordinates   1491862..1492326 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. FSL M8-0054     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1486862..1497326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY56_RS07960 (MKY56_07960) kinA 1487329..1489149 (+) 1821 WP_046380991.1 sporulation histidine kinase KinA -
  MKY56_RS07965 (MKY56_07965) - 1489159..1490340 (-) 1182 WP_014479654.1 aminotransferase A -
  MKY56_RS07970 (MKY56_07970) - 1490542..1490703 (-) 162 WP_003245246.1 hypothetical protein -
  MKY56_RS07975 (MKY56_07975) cheV 1490907..1491818 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  MKY56_RS07980 (MKY56_07980) kre 1491862..1492326 (-) 465 WP_003232406.1 YkyB family protein Regulator
  MKY56_RS07985 (MKY56_07985) - 1492452..1493744 (-) 1293 WP_015252195.1 MFS transporter -
  MKY56_RS07990 (MKY56_07990) - 1493820..1494314 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  MKY56_RS07995 (MKY56_07995) - 1494371..1495231 (-) 861 WP_003232400.1 metallophosphoesterase -
  MKY56_RS08000 (MKY56_08000) fadH 1495374..1496138 (+) 765 WP_339249558.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=968219 MKY56_RS07980 WP_003232406.1 1491862..1492326(-) (kre) [Bacillus sp. FSL M8-0054]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=968219 MKY56_RS07980 WP_003232406.1 1491862..1492326(-) (kre) [Bacillus sp. FSL M8-0054]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment