Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MKY56_RS04950 Genome accession   NZ_CP150257
Coordinates   941448..942242 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0054     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 936448..947242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY56_RS04920 (MKY56_04920) - 937287..938318 (+) 1032 WP_029317459.1 iron ABC transporter permease -
  MKY56_RS04925 (MKY56_04925) - 938433..939314 (+) 882 WP_046380867.1 PhzF family phenazine biosynthesis isomerase -
  MKY56_RS04930 (MKY56_04930) - 939402..939986 (+) 585 WP_032723010.1 nitroreductase -
  MKY56_RS04935 (MKY56_04935) - 940025..940216 (-) 192 WP_003233561.1 YfhD family protein -
  MKY56_RS04940 (MKY56_04940) - 940283..940393 (-) 111 WP_003223230.1 YfhE family protein -
  MKY56_RS04945 (MKY56_04945) - 940448..941359 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  MKY56_RS04950 (MKY56_04950) recX 941448..942242 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  MKY56_RS04955 (MKY56_04955) - 942244..942558 (+) 315 WP_003244592.1 YfhH family protein -
  MKY56_RS04960 (MKY56_04960) - 942701..943894 (+) 1194 WP_003243500.1 MFS transporter -
  MKY56_RS04965 (MKY56_04965) - 943926..944078 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  MKY56_RS04970 (MKY56_04970) - 944203..944472 (+) 270 WP_015252516.1 YfhJ family protein -
  MKY56_RS04975 (MKY56_04975) - 944617..945135 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  MKY56_RS04980 (MKY56_04980) spdL 945220..945552 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  MKY56_RS04985 (MKY56_04985) ephM 945539..946399 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=968202 MKY56_RS04950 WP_029726844.1 941448..942242(+) (recX) [Bacillus sp. FSL M8-0054]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=968202 MKY56_RS04950 WP_029726844.1 941448..942242(+) (recX) [Bacillus sp. FSL M8-0054]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment