Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MKX71_RS16290 Genome accession   NZ_CP150256
Coordinates   3129041..3129685 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0071     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3124041..3134685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX71_RS16255 (MKX71_16255) - 3125233..3125664 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  MKX71_RS16260 (MKX71_16260) - 3125664..3126005 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  MKX71_RS16265 (MKX71_16265) - 3125998..3127479 (+) 1482 WP_003228817.1 Na+/H+ antiporter subunit D -
  MKX71_RS16270 (MKX71_16270) - 3127485..3127961 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  MKX71_RS16275 (MKX71_16275) - 3127961..3128245 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  MKX71_RS16280 (MKX71_16280) mnhG 3128229..3128603 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  MKX71_RS16285 (MKX71_16285) - 3128642..3129022 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  MKX71_RS16290 (MKX71_16290) comA 3129041..3129685 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  MKX71_RS16295 (MKX71_16295) comP 3129766..3132063 (-) 2298 WP_130572792.1 histidine kinase Regulator
  MKX71_RS16300 (MKX71_16300) comX 3132071..3132232 (-) 162 WP_003241045.1 competence pheromone ComX -
  MKX71_RS16305 (MKX71_16305) - 3132247..3133107 (-) 861 WP_174222604.1 polyprenyl synthetase family protein -
  MKX71_RS16310 (MKX71_16310) degQ 3133292..3133432 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  MKX71_RS16315 (MKX71_16315) - 3133654..3133716 (+) 63 Protein_3147 hypothetical protein -
  MKX71_RS16320 (MKX71_16320) - 3133894..3134262 (+) 369 WP_212129296.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=968172 MKX71_RS16290 WP_003220716.1 3129041..3129685(-) (comA) [Bacillus sp. FSL M8-0071]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=968172 MKX71_RS16290 WP_003220716.1 3129041..3129685(-) (comA) [Bacillus sp. FSL M8-0071]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment