Detailed information    

insolico Bioinformatically predicted

Overview


Name   nucA/comI   Type   Machinery gene
Locus tag   MKX71_RS12845 Genome accession   NZ_CP150256
Coordinates   2510341..2510751 (-) Length   136 a.a.
NCBI ID   WP_009967785.1    Uniprot ID   A0A6I4D881
Organism   Bacillus sp. FSL M8-0071     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2505341..2515751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX71_RS12815 (MKX71_12815) - 2505428..2505568 (+) 141 WP_003226124.1 sporulation histidine kinase inhibitor Sda -
  MKX71_RS12820 (MKX71_12820) - 2505874..2506605 (-) 732 WP_043857847.1 SGNH/GDSL hydrolase family protein -
  MKX71_RS12825 (MKX71_12825) cwlH 2506857..2507609 (-) 753 Protein_2476 N-acetylmuramoyl-L-alanine amidase CwlH -
  MKX71_RS12830 (MKX71_12830) - 2507796..2508422 (+) 627 WP_024572279.1 TVP38/TMEM64 family protein -
  MKX71_RS12835 (MKX71_12835) gnd 2508441..2509334 (-) 894 WP_038829699.1 phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) -
  MKX71_RS12840 (MKX71_12840) - 2509586..2510308 (+) 723 WP_010886572.1 hypothetical protein -
  MKX71_RS12845 (MKX71_12845) nucA/comI 2510341..2510751 (-) 411 WP_009967785.1 sporulation-specific Dnase NucB Machinery gene
  MKX71_RS12850 (MKX71_12850) - 2510947..2511297 (+) 351 Protein_2481 sigma-70 family RNA polymerase sigma factor -
  MKX71_RS12855 (MKX71_12855) - 2511437..2511907 (+) 471 WP_033884465.1 MarR family transcriptional regulator -
  MKX71_RS12860 (MKX71_12860) - 2512058..2513470 (+) 1413 WP_327842652.1 MDR family MFS transporter -
  MKX71_RS12865 (MKX71_12865) spoIVCA 2513657..2515117 (-) 1461 WP_277737219.1 site-specific DNA recombinase SpoIVCA -
  MKX71_RS12870 (MKX71_12870) - 2515075..2515253 (-) 179 Protein_2485 hypothetical protein -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 14967.97 Da        Isoelectric Point: 5.1853

>NTDB_id=968163 MKX71_RS12845 WP_009967785.1 2510341..2510751(-) (nucA/comI) [Bacillus sp. FSL M8-0071]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ

Nucleotide


Download         Length: 411 bp        

>NTDB_id=968163 MKX71_RS12845 WP_009967785.1 2510341..2510751(-) (nucA/comI) [Bacillus sp. FSL M8-0071]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTACCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I4D881

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

62.609

84.559

0.529


Multiple sequence alignment