Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   MKX71_RS12595 Genome accession   NZ_CP150256
Coordinates   2466898..2467665 (-) Length   255 a.a.
NCBI ID   WP_041850024.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0071     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 2461898..2472665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX71_RS12575 (MKX71_12575) - 2462073..2462885 (-) 813 WP_003230064.1 pyruvate, water dikinase regulatory protein -
  MKX71_RS12580 (MKX71_12580) ccpN 2462911..2463549 (-) 639 WP_003237058.1 transcriptional regulator CcpN -
  MKX71_RS12585 (MKX71_12585) glyS 2463682..2465721 (-) 2040 WP_032722129.1 glycine--tRNA ligase subunit beta -
  MKX71_RS12590 (MKX71_12590) glyQ 2465714..2466601 (-) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  MKX71_RS12595 (MKX71_12595) recO 2466898..2467665 (-) 768 WP_041850024.1 DNA repair protein RecO Machinery gene
  MKX71_RS12600 (MKX71_12600) - 2467702..2467845 (-) 144 WP_003230053.1 YqzL family protein -
  MKX71_RS12605 (MKX71_12605) era 2467993..2468898 (-) 906 WP_003230051.1 GTPase Era -
  MKX71_RS12610 (MKX71_12610) - 2468879..2469289 (-) 411 WP_003230049.1 cytidine deaminase -
  MKX71_RS12615 (MKX71_12615) - 2469408..2469779 (-) 372 WP_015384119.1 diacylglycerol kinase family protein -
  MKX71_RS12620 (MKX71_12620) ybeY 2469760..2470233 (-) 474 WP_003230039.1 rRNA maturation RNase YbeY -
  MKX71_RS12625 (MKX71_12625) pgpH 2470234..2472369 (-) 2136 WP_010886570.1 cyclic-di-AMP phosphodiesterase PgpH -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29376.06 Da        Isoelectric Point: 8.3080

>NTDB_id=968159 MKX71_RS12595 WP_041850024.1 2466898..2467665(-) (recO) [Bacillus sp. FSL M8-0071]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHFMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=968159 MKX71_RS12595 WP_041850024.1 2466898..2467665(-) (recO) [Bacillus sp. FSL M8-0071]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACTTTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTAGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAATCCTTATTTATTTGAATTCATATTAGAGTCATTAAAACAGCTAAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTAAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATCAA
ACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTTGATCTGTCGAGACTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATTTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.216

100

0.992

Multiple sequence alignment