Detailed information    

insolico Bioinformatically predicted

Overview


Name   abrB   Type   Regulator
Locus tag   MKX71_RS07840 Genome accession   NZ_CP150256
Coordinates   1507102..1507380 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus sp. FSL M8-0071     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context


Location: 1502102..1512380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX71_RS07820 (MKX71_07820) - 1503290..1504201 (+) 912 WP_144482487.1 ketopantoate reductase family protein -
  MKX71_RS07825 (MKX71_07825) - 1504235..1505467 (-) 1233 WP_144482486.1 aminopeptidase -
  MKX71_RS07830 (MKX71_07830) - 1505576..1505710 (-) 135 WP_003238865.1 protein YkpC -
  MKX71_RS07835 (MKX71_07835) mreBH 1505811..1506818 (-) 1008 WP_003245743.1 cell shape-determining protein MreBH -
  MKX71_RS07840 (MKX71_07840) abrB 1507102..1507380 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  MKX71_RS07845 (MKX71_07845) kinC 1507570..1508856 (+) 1287 WP_003232333.1 two-component sensor histidine kinase KinC -
  MKX71_RS07850 (MKX71_07850) - 1508872..1509705 (+) 834 WP_144482485.1 gamma-glutamylcyclotransferase -
  MKX71_RS07855 (MKX71_07855) ktrC 1509768..1510433 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  MKX71_RS07860 (MKX71_07860) ade 1510589..1512322 (+) 1734 WP_144482484.1 adenine deaminase -

Sequence


Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=968142 MKX71_RS07840 WP_003244728.1 1507102..1507380(+) (abrB) [Bacillus sp. FSL M8-0071]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=968142 MKX71_RS07840 WP_003244728.1 1507102..1507380(+) (abrB) [Bacillus sp. FSL M8-0071]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576


Multiple sequence alignment