Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   MKX71_RS05690 Genome accession   NZ_CP150256
Coordinates   1110484..1111062 (+) Length   192 a.a.
NCBI ID   WP_029317573.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0071     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1105484..1116062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX71_RS05670 (MKX71_05670) hemAT 1105995..1107293 (-) 1299 WP_003245216.1 heme-based aerotactic transducer HemAT -
  MKX71_RS05675 (MKX71_05675) - 1107432..1108961 (-) 1530 WP_317680021.1 FAD-dependent oxidoreductase -
  MKX71_RS05680 (MKX71_05680) - 1109073..1109930 (+) 858 WP_003245662.1 SDR family oxidoreductase -
  MKX71_RS05685 (MKX71_05685) - 1109958..1110191 (-) 234 WP_003233142.1 IDEAL domain-containing protein -
  MKX71_RS05690 (MKX71_05690) comK 1110484..1111062 (+) 579 WP_029317573.1 competence transcription factor ComK Regulator
  MKX71_RS05695 (MKX71_05695) - 1111109..1112008 (-) 900 WP_339231837.1 SDR family oxidoreductase -
  MKX71_RS05700 (MKX71_05700) - 1112225..1112494 (+) 270 WP_003233136.1 excalibur calcium-binding domain-containing protein -
  MKX71_RS05705 (MKX71_05705) - 1112537..1114006 (-) 1470 WP_106073785.1 sodium:solute symporter -
  MKX71_RS05710 (MKX71_05710) - 1114003..1114203 (-) 201 WP_015252421.1 DUF3311 domain-containing protein -
  MKX71_RS05715 (MKX71_05715) - 1114402..1114773 (-) 372 WP_014476361.1 hypothetical protein -
  MKX71_RS05720 (MKX71_05720) - 1114925..1115548 (+) 624 WP_010886465.1 VTT domain-containing protein -
  MKX71_RS05725 (MKX71_05725) lepB 1115550..1116056 (+) 507 WP_003233128.1 signal peptidase I -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22457.70 Da        Isoelectric Point: 7.7156

>NTDB_id=968128 MKX71_RS05690 WP_029317573.1 1110484..1111062(+) (comK) [Bacillus sp. FSL M8-0071]
MSQKTDAPLESYEVNGATIAVLPEEIDGKICSRIIEKDCVFYVNMKPLQIVDRSCRFFGSSYAGRKAGTYEVTKISHKPP
IMVDPSNQIFLFPTLSSTRPQCGWISHVHVKEFKATEFDDTEVTFSNGKTMELPISYNSFENQVYRTAWLRTKFQDRIDH
RVPKRQEFMLYPKEERTKMIYDFILRELGERY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=968128 MKX71_RS05690 WP_029317573.1 1110484..1111062(+) (comK) [Bacillus sp. FSL M8-0071]
ATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGA
CGGCAAAATCTGTTCCAGAATTATTGAAAAAGATTGCGTGTTTTATGTAAACATGAAGCCACTGCAAATTGTCGACAGAA
GCTGCCGATTTTTTGGATCAAGCTATGCGGGAAGAAAAGCAGGAACTTATGAAGTGACAAAAATTTCACACAAGCCGCCG
ATCATGGTGGACCCTTCGAACCAAATCTTTTTATTCCCTACACTTTCTTCGACAAGACCCCAATGCGGCTGGATTTCCCA
TGTGCATGTAAAAGAATTCAAAGCGACTGAATTTGACGATACGGAAGTGACGTTTTCAAATGGGAAAACGATGGAGCTGC
CGATCTCTTATAATTCGTTCGAGAACCAGGTATACCGAACAGCGTGGCTCAGAACCAAATTCCAAGACAGAATCGACCAC
CGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGA
GCTCGGGGAACGGTATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

99.479

100

0.995

Multiple sequence alignment