Detailed information NTG0096809

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OO774_RS03010
• Genome accession: NZ_AP026763
• Coordinates: 632129..635515 (-)
• Length: 1128 a.a.
• NCBI ID: WP_264904586.1
• Uniprot ID: -
• Organism: Vibrio sp. STUT-A11
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 627129..640515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OO774_RS02995 (VspSTUT11_05110)	-	627430..628455 (-)	1026	WP_264904581.1	ABC transporter permease	-
OO774_RS03000 (VspSTUT11_05120)	-	628458..629444 (-)	987	WP_264904583.1	ABC transporter permease	-
OO774_RS03005 (VspSTUT11_05130)	-	629580..631256 (-)	1677	WP_264904585.1	ABC transporter substrate-binding protein	-
OO774_RS03010 (VspSTUT11_05140)	chiS	632129..635515 (-)	3387	WP_264904586.1	response regulator	Regulator
OO774_RS03015 (VspSTUT11_05150)	rsmC	635743..636768 (-)	1026	WP_264904588.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OO774_RS03020 (VspSTUT11_05160)	-	636845..637930 (-)	1086	WP_264906049.1	AI-2E family transporter	-
OO774_RS03025 (VspSTUT11_05170)	hemL	638273..639565 (-)	1293	WP_264904590.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OO774_RS03030 (VspSTUT11_05180)	erpA	639808..640149 (+)	342	WP_014232903.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127241.76 Da
• Isoelectric Point: 5.5108

>NTDB_id=96809 OO774_RS03010 WP_264904586.1 632129..635515(-) (chiS) [Vibrio sp. STUT-A11]
MFKFYKKQKFKRLQSTLMTAFLVLSLTPLTITAFFFLQSHSQDLQEQSTSHLLSVRDTKQQQIVDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRQNAQQRYIEGSGDQTKTSILPESSNYAGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLTGRYKDSALGKAFHRLADDVSERRKVNEDYTPILVSDFELEKGKPVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLVADQNRESSIETLLVGGDQQPRTINTKLNDIQNSMEVISQALSGQTNVGTYTNGLDEA
IIAAYAPVKTRGVNWALIVQLPEKDAFSRIHQLEKLFVIAMITAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TTFDTIRKDEIGRLASSFERMQRSIREKIQTIKKQNEELESNIRLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLISGANGALPANQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMGIQKSAVSLASSTRLVLELSGHLLGNKTIRI
INQVPNDLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAGVVDDLVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDES
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEILATQTLAACGHFQAPETNLDNSDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLDLVEQEKPELLLLDIMMPGMSGYQVCSELRKIYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEIRHIENKQLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQIKRSSADELIAPKFLTVKQPHYCGKIDIYVEDIRQNIEADVLKLPEGS
GLDVMYIFNVGGGANTARIHNLETAVEVLSRYAFDGDKEQLQKLKELGGEFTRLADKALGNKKDKQEVMREVLVEAMTRA
LEYWESVTGESKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=96809 OO774_RS03010 WP_264904586.1 632129..635515(-) (chiS) [Vibrio sp. STUT-A11]
ATGTTCAAATTCTACAAAAAACAGAAGTTTAAGCGTCTACAGAGTACGCTGATGACTGCGTTTCTTGTCCTCAGCCTTAC
GCCTCTAACCATTACTGCGTTTTTTTTCCTGCAGTCACACAGCCAAGATCTGCAAGAACAGAGCACGTCACACCTTTTGT
CTGTAAGAGATACCAAGCAACAGCAGATTGTTGACTACTTTGAAGCACGCGAAACCGAAGTGATGGGCTTCGTCCGCTCG
GAATTAGCCTATGCCAGCGGCGGACGTTTTTATGGTTTAGTCAATGCGTTCAGTCGGTTAGGAAATGACATTGAGGAGTC
TCGTCAAAATGCACAGCAACGTTACATTGAAGGCAGTGGTGATCAAACAAAAACGTCAATATTGCCAGAATCATCCAATT
ATGCTGGCAGTGAGCGCTATCGCCTACTCCACAAACGCTATCATTGGGCTTATTTAGAACTTCTTAAACGCTCTGACTTC
AATGACATATTACTCGTCGATATTAACGGCAACGTTACCTACTCAATCAACAAAGATGACAATTACGGCACCAATCTTCT
CACAGGTCGCTATAAAGATTCCGCGTTAGGTAAGGCATTTCACCGCTTAGCCGACGATGTCAGCGAGCGTCGTAAAGTTA
ACGAAGACTACACGCCAATACTTGTCTCTGATTTTGAACTTGAAAAGGGTAAGCCGGTAGCTTGGCTTGGTGCACCAATC
GTTCAACAAGGGTACCTACACAGCTACGCCATGTTCCGCTTGCCAAACAACGGTATCACTAAATTAGTAGCTGACCAAAA
TCGCGAGTCATCGATTGAAACCTTACTAGTGGGGGGAGATCAACAACCTCGTACAATAAACACCAAACTGAATGATATCC
AAAATAGTATGGAGGTCATCAGTCAGGCACTTTCAGGTCAAACAAACGTCGGCACTTATACAAACGGACTCGATGAAGCT
ATTATCGCCGCCTATGCGCCAGTAAAAACTCGTGGCGTAAACTGGGCCTTGATCGTACAGTTACCGGAGAAAGACGCTTT
TTCTCGTATCCACCAGTTGGAAAAACTCTTCGTTATTGCGATGATCACAGCAATCATACTGGTTGTGATTGCCTCACACT
ATCTATCGAACTTTATTACTTCCCCACTACTCAAATTAACCTGGGCAGCAGAGCGAGTATCAGCAGGCGATCTGGATGAA
ACGACGTTCGATACCATCAGAAAAGATGAAATTGGCCGATTAGCCAGCAGTTTCGAGCGGATGCAGCGCTCTATTCGTGA
AAAAATTCAGACCATCAAAAAGCAAAATGAAGAGCTGGAAAGCAACATCCGCTTAATTCAAAAACAAAATGACGAGCTAC
AACTCGCAGACAAGCTAAAAGATGAGTTTCTGGCAACCACCTCTCATGAACTGCGTACGCCTTTACACGGTATGGTGGGT
ATTGCGGAAACTCTAATTTCCGGAGCCAACGGCGCGCTCCCGGCAAACCAGAAATATCAGCTTGATATTATTATCAAAAG
TGGACAACGCTTGGCCAACCTCGTCGACGACTTACTGGATTACCATAAAATGCGTTACGGTAGCATGGGCATCCAGAAGT
CGGCGGTCAGTTTGGCAAGCTCAACTCGATTGGTACTGGAGCTGTCTGGCCACTTACTTGGTAACAAGACCATTCGGATC
ATCAATCAGGTACCGAATGATCTCAAAGCAGTATCAGCAGATCCACAACGACTTGAACAGGTGCTGTACAACCTGATAGG
TAACGCAATTAAGTACACATCTGAAGGTAAGATCGTTATTTCAGCAGGAGTCGTTGACGATCTAGTCCGCGTTCAAGTGG
TCGATACCGGACAGGGCATCCCAGCAGAACACCTTGAGCACATCTTTGAGCCTTTAATTCAGGCAGGACAAGATGAAAGT
CGCTATCGTCAAGGTGCTGGATTAGGCTTATCAATTAGCCGCCAGTTAATTGAGCTAATGGGTGGCTCCTTATATGTAAG
TAGCCAACCAATGGTAGGTACTACATTCAGCTTCACTTTACCTCTCGCCAGTGAAGAAGAGATTCTGGCCACGCAGACGC
TGGCTGCCTGTGGGCATTTCCAGGCTCCAGAAACCAATTTGGACAACAGCGATGATCTATCGCTGCCAGAGAACCCGGAT
GGCCCACTGCTTTATGTCGCAGACGACGAACCCGTCAACCTGCGTGTACTTGAAAGCTTTTTGCGTTTAGAAGGCTATCG
TGTACGAACTGTTTCGGACGGCCCAGAAACACTTGATCTTGTCGAACAAGAAAAACCGGAACTGTTACTGCTCGATATCA
TGATGCCAGGCATGAGTGGCTATCAGGTATGTAGTGAACTGCGTAAAATCTATGATCATGCCGAGCTGCCAATTATTATG
TTAACAGCACTTAGTCAAACTGAAGACCGCGTTAGAGGCTTTGAGGCTGGAGCGAACGATTACTTATCTAAGCCTTTTAA
TAAACAAGAACTTGCAGCTAGAATTCAGGCCCATTTAACGGCAAGCAAAGCAGAAATTCGTCATATTGAGAATAAGCAAC
TTGAGTCGGAGCTTCGCCAACGAGCTGAAGTCGAAGCGAGCCTGCTTGAAACTCAGGGTCGTCTGCTAGAACAACTTGAA
TCCGCTCCTGAGGCCATCATCTGCTTGCGCGAAGATCAGCGTATTCGCTTTGCCAACGAAGCTGCGTGTAAGTTATTTAA
ACGTAGTTTAGAGCAAATTAAACGCTCTTCAGCTGATGAGCTAATTGCGCCAAAATTCCTCACCGTTAAACAGCCACATT
ATTGCGGGAAAATTGATATCTATGTCGAGGACATTCGTCAAAATATTGAAGCGGATGTTCTCAAACTCCCTGAAGGCTCT
GGCTTAGACGTTATGTATATATTCAATGTGGGTGGCGGCGCGAATACAGCCCGTATCCATAACCTGGAAACAGCAGTAGA
GGTGCTTTCTCGCTATGCCTTTGACGGCGACAAAGAACAGTTACAGAAGCTTAAAGAGCTTGGAGGTGAATTCACTCGAC
TGGCAGACAAAGCGTTAGGCAATAAAAAAGACAAACAGGAAGTGATGCGTGAAGTTCTGGTCGAAGCAATGACTCGCGCT
TTGGAATACTGGGAGTCCGTGACTGGCGAAAGTAAGTTTACCTTTGCCGAGCAAAGTGGCCTTTGGCGCGTTTATCTTGA
TCGTAGTACGCTACAAACCCGTACTTTAGATAAATACATGCGCATTGAAACCTTACCTAAAACTCCACGCTGGAGAACGG
TTTTAAGCTCTATCGAGTTTATACTCGAGCATTGTAAAGAACAAAGCCCGGAACGCGCTTACATTGAAGCACAGCGTGAC
AAACTGCAAAGGTTGCTTACCAGCTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

• PAS domain (PAS_8) (879-917)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.221	100	0.754