Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MKZ05_RS11085 Genome accession   NZ_CP150255
Coordinates   2219135..2220871 (-) Length   578 a.a.
NCBI ID   WP_339160128.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0277     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2214135..2225871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKZ05_RS11070 (MKZ05_11070) - 2215013..2216113 (-) 1101 WP_003215741.1 Rap family tetratricopeptide repeat protein -
  MKZ05_RS11075 (MKZ05_11075) spo0A 2216570..2217373 (-) 804 WP_003215740.1 sporulation transcription factor Spo0A Regulator
  MKZ05_RS11080 (MKZ05_11080) spoIVB 2217659..2218936 (-) 1278 WP_003215755.1 SpoIVB peptidase -
  MKZ05_RS11085 (MKZ05_11085) recN 2219135..2220871 (-) 1737 WP_339160128.1 DNA repair protein RecN Machinery gene
  MKZ05_RS11090 (MKZ05_11090) argR 2220905..2221354 (-) 450 WP_003215836.1 transcriptional regulator ArgR -
  MKZ05_RS11095 (MKZ05_11095) - 2221514..2222368 (-) 855 WP_137054989.1 TlyA family RNA methyltransferase -
  MKZ05_RS11100 (MKZ05_11100) dxs 2222365..2224266 (-) 1902 WP_137054988.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MKZ05_RS11105 (MKZ05_11105) - 2224417..2225307 (-) 891 WP_113387134.1 polyprenyl synthetase family protein -
  MKZ05_RS11110 (MKZ05_11110) - 2225297..2225557 (-) 261 WP_003215880.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64843.66 Da        Isoelectric Point: 4.8146

>NTDB_id=968082 MKZ05_RS11085 WP_339160128.1 2219135..2220871(-) (recN) [Bacillus sp. FSL M8-0277]
MLAELTIKNFAIIEELTVSFEKGLTVLTGETGAGKSIMIDAVSLLVGGRGSSEFVRYGEKKAELEGLFLVPAADHPVFAL
CEEQGIDATDEMMILRRDMNNNGKSICRINGKLVTISLLREVGRLLLDIHGQHDNQLLMEDENHLHLLDQFGAEEIAPAL
SQYQEAYEQYTKTAQKLKQLSENEQEMVHRLDLLQFQLEEIEAAQLEPGEDEKLQEERHQISNYEKIFSSLQNAYNALRN
EQGGLDWVGMSSSELEQVSEINDDLKKLSEQVSNSYYLLEDSTFQMRSMLDQLEFDPARLDFIESRLNEMKQLKRKYGTT
VEEILEYAAKIEEEIDQIQNRDSHLQTLKNKLDAMSRDALLEALNVSELRKKWAKKLAKQIQTELKDLYMEKSTFDTSFS
IRYAPFSSTDHPLLDGKPVQLGKNGIDQAQFVISTNPGEPMKSLSKVASGGEISRVMLAVKSIFSAKQEVTSIIFDEVDT
GVSGRVAQAIAEKIYKVAAGSQVLCITHLPQVAAMADTHLFISKRSKAGRTLTSVKPLSHEEKVSEIGRMIAGVEVTELT
KQHAKELLHQANDVKTTG

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=968082 MKZ05_RS11085 WP_339160128.1 2219135..2220871(-) (recN) [Bacillus sp. FSL M8-0277]
GTGTTAGCAGAACTAACCATTAAAAACTTTGCAATCATTGAAGAGTTAACAGTTTCATTTGAAAAAGGACTCACAGTCCT
AACAGGGGAAACAGGTGCAGGGAAATCCATCATGATTGATGCTGTCTCACTTCTTGTGGGAGGTAGAGGGTCGTCTGAAT
TTGTTCGTTATGGTGAGAAAAAGGCTGAGCTGGAGGGGCTTTTTCTTGTACCAGCAGCTGACCACCCTGTATTTGCTTTA
TGCGAAGAGCAGGGAATTGACGCAACGGATGAAATGATGATTCTTCGCCGTGATATGAACAATAACGGGAAAAGCATATG
CCGCATCAATGGCAAGCTCGTTACAATCTCACTTTTACGCGAAGTAGGACGCCTTTTGCTCGATATACATGGACAGCACG
ATAACCAGTTATTGATGGAGGATGAAAATCATCTGCATTTACTCGATCAATTTGGAGCAGAAGAAATTGCACCTGCTCTG
TCACAGTATCAAGAAGCATATGAGCAATATACAAAGACAGCCCAAAAGCTAAAACAGCTCTCTGAGAATGAGCAGGAAAT
GGTGCACCGGTTAGATTTACTGCAATTTCAGCTAGAAGAGATTGAAGCGGCACAATTAGAGCCGGGAGAAGATGAGAAGC
TTCAAGAAGAGCGCCATCAGATCAGCAACTACGAAAAAATCTTTTCCTCACTCCAAAACGCCTATAATGCCTTGCGCAAT
GAGCAGGGGGGACTTGATTGGGTTGGCATGTCATCAAGCGAGCTCGAGCAGGTTTCTGAGATCAACGACGATCTGAAAAA
GCTATCCGAACAAGTGTCGAACTCTTACTATTTATTAGAGGATTCGACGTTCCAAATGCGAAGCATGCTGGATCAATTAG
AGTTCGACCCAGCACGACTTGATTTTATTGAGTCTAGGCTGAATGAAATGAAGCAGTTAAAACGAAAGTACGGGACAACG
GTTGAGGAAATTTTGGAGTATGCGGCGAAGATTGAAGAAGAAATCGATCAAATTCAAAATCGAGACAGTCACTTGCAGAC
GCTTAAAAACAAACTGGATGCAATGAGCCGTGACGCCCTGCTTGAAGCACTTAACGTTTCGGAGCTTCGTAAAAAATGGG
CCAAAAAGCTAGCGAAGCAAATTCAAACAGAACTAAAGGATTTGTATATGGAGAAGTCAACGTTTGATACATCCTTTTCC
ATTCGGTATGCGCCTTTTAGCAGCACGGATCATCCGCTGCTAGATGGAAAGCCCGTCCAGCTTGGAAAAAACGGAATCGA
CCAAGCTCAATTTGTGATTTCTACTAATCCTGGCGAACCGATGAAATCTTTATCAAAAGTTGCCTCGGGTGGAGAAATTT
CACGTGTTATGCTCGCCGTGAAAAGTATCTTCTCAGCCAAACAAGAAGTCACTTCCATTATTTTCGATGAGGTCGATACG
GGCGTAAGCGGCAGAGTTGCACAGGCGATTGCCGAAAAAATTTACAAAGTGGCGGCTGGCTCACAAGTACTCTGCATTAC
GCACCTCCCGCAAGTAGCAGCAATGGCTGACACGCACCTCTTCATTTCTAAACGCTCTAAAGCAGGCAGAACACTGACAA
GCGTCAAACCATTAAGTCATGAAGAAAAAGTGAGTGAAATTGGCAGGATGATTGCGGGTGTGGAAGTCACTGAACTGACA
AAACAGCACGCAAAAGAGTTGCTACATCAAGCAAATGATGTCAAAACAACAGGGTAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-525)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

74.913

100

0.749

Multiple sequence alignment