Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY17_RS26210 Genome accession   NZ_CP150254
Coordinates   5406673..5407623 (-) Length   316 a.a.
NCBI ID   WP_098371512.1    Uniprot ID   -
Organism   Peribacillus sp. FSL P2-0133     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5401673..5412623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY17_RS26195 (MKY17_26195) - 5403826..5404773 (-) 948 WP_098371509.1 siderophore ABC transporter substrate-binding protein -
  MKY17_RS26200 (MKY17_26200) - 5404981..5405739 (-) 759 WP_098371510.1 ABC transporter ATP-binding protein -
  MKY17_RS26205 (MKY17_26205) - 5405733..5406680 (-) 948 WP_098371511.1 iron chelate uptake ABC transporter family permease subunit -
  MKY17_RS26210 (MKY17_26210) ceuB 5406673..5407623 (-) 951 WP_098371512.1 ABC transporter permease Machinery gene
  MKY17_RS26215 (MKY17_26215) - 5407888..5408229 (+) 342 WP_098371513.1 DUF1450 domain-containing protein -
  MKY17_RS26220 (MKY17_26220) - 5408449..5410098 (+) 1650 WP_098371514.1 M14 family metallocarboxypeptidase -
  MKY17_RS26225 (MKY17_26225) shc 5410266..5412161 (+) 1896 WP_286177035.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34938.26 Da        Isoelectric Point: 9.6488

>NTDB_id=968036 MKY17_RS26210 WP_098371512.1 5406673..5407623(-) (ceuB) [Peribacillus sp. FSL P2-0133]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLDLSDDKVQIMLQSRFPRMVTIVISGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDRVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKLIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=968036 MKY17_RS26210 WP_098371512.1 5406673..5407623(-) (ceuB) [Peribacillus sp. FSL P2-0133]
ATGAAGATAAGATATTTAGTCATGGCATTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAGGATATTACCCC
CCTGGATTTATTGGATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCCAGAATGGTGACCATAGTCA
TTTCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGAACCATGGATTCTGCAAGGCTTGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCGAGTGAAATATAAGGATACGATTT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTCGGATCCATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACTTGGATGAATGGGGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATGTAAGTATCCC
TCTGGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGCTTATAGTCAATTTTGGGTTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTACTAGGGGCAGTATTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50

100

0.5

Multiple sequence alignment