Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   AACH38_RS03140 Genome accession   NZ_AP028992
Coordinates   682568..683242 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain TUM19957     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 677568..688242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH38_RS03115 (TUM19957_05820) - 677783..678850 (+) 1068 WP_000980142.1 membrane protein -
  AACH38_RS03120 (TUM19957_05830) - 679001..680044 (+) 1044 WP_001078080.1 alpha/beta hydrolase -
  AACH38_RS03125 (TUM19957_05840) - 680373..680801 (+) 429 WP_000198504.1 hypothetical protein -
  AACH38_RS03130 (TUM19957_05850) - 681010..681516 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  AACH38_RS03135 (TUM19957_05860) graX 681629..682552 (+) 924 WP_000802952.1 auxiliary protein GraX/ApsX -
  AACH38_RS03140 (TUM19957_05870) braR 682568..683242 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  AACH38_RS03145 (TUM19957_05880) graS 683235..684275 (+) 1041 WP_001061259.1 histidine kinase GraS/ApsS -
  AACH38_RS03150 (TUM19957_05890) vraF 684422..685183 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  AACH38_RS03155 (TUM19957_05900) - 685173..687062 (+) 1890 WP_000009398.1 ABC transporter permease -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=96803 AACH38_RS03140 WP_001166505.1 682568..683242(+) (braR) [Staphylococcus aureus strain TUM19957]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=96803 AACH38_RS03140 WP_001166505.1 682568..683242(+) (braR) [Staphylococcus aureus strain TUM19957]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAATGTGCCAATATTATTCTTATCATCTCGT
GACAACCCGATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGACAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATTTTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402


Multiple sequence alignment