Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MKY17_RS18470 Genome accession   NZ_CP150254
Coordinates   3854416..3856131 (-) Length   571 a.a.
NCBI ID   WP_098369847.1    Uniprot ID   -
Organism   Peribacillus sp. FSL P2-0133     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3849416..3861131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY17_RS18445 (MKY17_18445) - 3849958..3850194 (+) 237 WP_098369850.1 DUF2627 domain-containing protein -
  MKY17_RS18450 (MKY17_18450) - 3850238..3850972 (-) 735 WP_098369849.1 glycerophosphodiester phosphodiesterase -
  MKY17_RS18455 (MKY17_18455) - 3851207..3851431 (-) 225 WP_098369848.1 hypothetical protein -
  MKY17_RS18460 (MKY17_18460) spo0A 3851840..3852631 (-) 792 Protein_3594 sporulation transcription factor Spo0A -
  MKY17_RS18465 (MKY17_18465) spoIVB 3852962..3854254 (-) 1293 WP_076365437.1 SpoIVB peptidase -
  MKY17_RS18470 (MKY17_18470) recN 3854416..3856131 (-) 1716 WP_098369847.1 DNA repair protein RecN Machinery gene
  MKY17_RS18475 (MKY17_18475) argR 3856154..3856603 (-) 450 WP_034308279.1 transcriptional regulator ArgR -
  MKY17_RS18480 (MKY17_18480) - 3856931..3857758 (-) 828 WP_098369846.1 TlyA family RNA methyltransferase -
  MKY17_RS18485 (MKY17_18485) dxs 3857763..3859655 (-) 1893 WP_098369845.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MKY17_RS18490 (MKY17_18490) - 3859905..3860798 (-) 894 WP_098369844.1 polyprenyl synthetase family protein -
  MKY17_RS18495 (MKY17_18495) - 3860800..3861033 (-) 234 WP_034308286.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 571 a.a.        Molecular weight: 64443.42 Da        Isoelectric Point: 5.2855

>NTDB_id=968021 MKY17_RS18470 WP_098369847.1 3854416..3856131(-) (recN) [Peribacillus sp. FSL P2-0133]
MLTELSIRNFAIIDSLSVSFEKGLTVLTGETGAGKSIIIDAVHLLVGGRGSAEFIRHGESKAEIEGLFQIEDVKHPVFAK
AEEFGIDMNDGMAILRRDISLSGKSVCRVNGKLVTISTLREIGRTLIDIHGQHEHQELMDERLHLPLLDQFGGEKIASAL
TEYQKLYKRYETASKQLNGLSQNEQQMVHRLDLIQFQFDEIQKADLKLREDEELMEERKKINNFEKIHEALQTSYNALNG
EQHAIDWLSVAMNNLEEAAGLDEGLKNSSETVSNSYFLLEEAVSNIRDQLDSLDYDTERVEFIESRLNEINQLKRKYGRT
IEEILEYGAAIEEEVEKLQNRETHIAKLEKEMKSIKADLIVEAKNLSELRQKFAQQLTKKIHQELKDLYMEKTIFEPHFL
QTAYTFDELSDRGINQSGLDSMEFYISTNPGEPLKPLSKIASGGELSRIMLALKSIFSKHQGITSIIFDEVDTGVSGRVA
QSIAEKIYKVATGSQVLCISHLPQVAAMADTHLFIAKNVRAGRTNTSVKPLIETEKIKEIGRMISGVEITDLTKQHANEL
IQLAKRLKITS

Nucleotide


Download         Length: 1716 bp        

>NTDB_id=968021 MKY17_RS18470 WP_098369847.1 3854416..3856131(-) (recN) [Peribacillus sp. FSL P2-0133]
TTGTTAACAGAACTATCGATTAGGAATTTTGCGATCATAGACAGCCTGTCCGTTTCATTTGAGAAAGGCTTGACGGTCTT
GACAGGAGAAACAGGGGCAGGGAAGTCAATCATAATAGATGCCGTTCATCTTTTGGTTGGGGGACGTGGTTCTGCAGAGT
TCATTCGGCATGGTGAGTCGAAGGCTGAAATAGAAGGATTATTCCAAATTGAAGATGTAAAACACCCGGTCTTTGCCAAA
GCGGAAGAGTTTGGCATCGATATGAATGATGGGATGGCGATACTTCGAAGGGATATCTCACTGAGCGGCAAAAGCGTTTG
CAGGGTAAACGGAAAGCTTGTAACGATTTCCACCTTACGTGAGATAGGACGGACGTTGATAGATATCCATGGTCAGCATG
AACATCAGGAATTAATGGACGAACGACTCCATCTTCCACTGCTCGATCAATTCGGCGGTGAAAAAATCGCATCTGCACTC
ACTGAATACCAAAAGCTATATAAACGTTATGAAACCGCTTCTAAACAATTGAATGGTTTGAGCCAAAATGAACAGCAAAT
GGTCCACCGCCTTGATTTGATCCAATTTCAATTCGATGAAATCCAAAAAGCTGATTTGAAATTACGCGAAGATGAAGAAT
TGATGGAAGAGCGGAAGAAAATTAATAATTTCGAAAAAATCCATGAAGCGCTGCAAACCAGTTATAATGCTTTAAATGGT
GAGCAGCATGCAATTGATTGGCTTTCCGTAGCCATGAATAATTTGGAGGAAGCGGCAGGGCTTGATGAAGGTTTAAAGAA
CAGCTCTGAAACCGTTTCAAATAGCTACTTCCTGCTTGAGGAGGCCGTGTCTAACATCCGTGACCAATTAGACTCTTTGG
ATTATGATACAGAGCGAGTGGAATTCATTGAAAGTCGCCTTAATGAAATAAATCAATTAAAGCGTAAATACGGGCGGACC
ATCGAGGAAATCCTGGAGTATGGGGCCGCTATTGAAGAAGAAGTCGAAAAGCTGCAAAATAGGGAAACCCATATAGCGAA
GCTTGAAAAGGAAATGAAATCCATCAAGGCAGATTTAATTGTCGAAGCAAAGAATCTGTCTGAACTTCGCCAGAAATTTG
CTCAGCAGCTAACCAAAAAGATTCATCAGGAATTAAAAGACTTATACATGGAAAAGACAATTTTTGAACCACATTTCCTT
CAAACGGCCTATACTTTCGATGAATTGTCAGATAGGGGCATCAATCAGTCAGGGCTGGATTCAATGGAATTTTATATTTC
CACCAATCCAGGTGAACCATTAAAACCTCTTTCTAAAATCGCATCTGGTGGTGAACTGTCGAGGATCATGCTGGCATTGA
AAAGCATATTCTCCAAGCACCAAGGTATAACGTCCATTATCTTTGATGAAGTGGACACAGGTGTGAGCGGACGGGTTGCG
CAATCCATTGCCGAAAAGATCTATAAAGTGGCAACCGGATCACAAGTACTGTGCATATCCCATTTGCCACAGGTGGCAGC
TATGGCGGATACACACCTTTTCATTGCGAAAAATGTAAGGGCCGGACGCACGAATACTTCGGTAAAGCCGTTAATTGAAA
CTGAAAAAATAAAAGAAATTGGCAGGATGATTTCAGGAGTAGAGATAACGGATTTGACGAAACAACATGCAAATGAATTA
ATCCAGCTTGCCAAAAGGCTGAAAATTACATCTTGA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-233)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

60.938

100

0.615

Multiple sequence alignment