Detailed information    

insolico Bioinformatically predicted

Overview


Name   pepF   Type   Regulator
Locus tag   MKY17_RS06535 Genome accession   NZ_CP150254
Coordinates   1361653..1363470 (+) Length   605 a.a.
NCBI ID   WP_339201529.1    Uniprot ID   -
Organism   Peribacillus sp. FSL P2-0133     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context


Location: 1356653..1368470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY17_RS06515 (MKY17_06515) spxA 1356971..1357366 (+) 396 WP_034314502.1 transcriptional regulator SpxA -
  MKY17_RS06520 (MKY17_06520) mecA 1357861..1358529 (+) 669 WP_098371288.1 adaptor protein MecA -
  MKY17_RS06525 (MKY17_06525) cls 1358649..1360157 (+) 1509 WP_339201525.1 cardiolipin synthase -
  MKY17_RS06530 (MKY17_06530) - 1360252..1361460 (+) 1209 WP_339201527.1 competence protein CoiA family protein -
  MKY17_RS06535 (MKY17_06535) pepF 1361653..1363470 (+) 1818 WP_339201529.1 oligoendopeptidase F Regulator
  MKY17_RS06540 (MKY17_06540) - 1364410..1365276 (-) 867 WP_260398031.1 ClpXP adapter SpxH family protein -
  MKY17_RS06545 (MKY17_06545) - 1365300..1365704 (-) 405 WP_053534150.1 globin -
  MKY17_RS06550 (MKY17_06550) - 1365939..1366598 (-) 660 WP_339201532.1 lytic transglycosylase domain-containing protein -
  MKY17_RS06555 (MKY17_06555) - 1366630..1367208 (-) 579 WP_339201534.1 CYTH domain-containing protein -
  MKY17_RS06560 (MKY17_06560) - 1367523..1368143 (+) 621 WP_034314484.1 GTP pyrophosphokinase family protein -

Sequence


Protein


Download         Length: 605 a.a.        Molecular weight: 69776.20 Da        Isoelectric Point: 4.7108

>NTDB_id=968012 MKY17_RS06535 WP_339201529.1 1361653..1363470(+) (pepF) [Peribacillus sp. FSL P2-0133]
MAQETKANTLPSRSEIAPEDTWRLEDIFATEEDWEAAFKAVKEDLKKAEGHKGTLGESAEKLFAALQLQDEVFEKLGKVY
SYSHMRNDQDTTNPFYQGMEDRAKALYAQAAAAFSFMVPELLSIDENKVEGFLEEKEDLKLYKHSLEEINLQRPHILSAE
QEELLAQASEVLDASGNTFGMLNNADLKFPTIKDEEGNEVEITHGRYISFLESEDRRVREEAFKGVYSKYGEFRNTFAST
LSGEVKNHNFNATVRKYESARQAALSNNNIPETVYDNLVKTVNDNLPLLHRYLDLRKKVLKLDELHMYDLFTPLVKEVKM
EVTYDDAKDYVLKGLAPLGEDYLNVLKEGFENRWVDVHENKGKRSGAYSSGTYGTNPYILMNWQNNVNNLFTLVHEFGHS
VHSYYTRKYQPYPYGNYSIFVAEVASTCNENLLNDYLLNSIEDEKKRIYLLNHYLEGFRGTLFRQTMFAEFEHTIHLKAQ
NGEALTADMLTKEYYELNKKYFGENVTIDEEIGLEWARIPHFYYNYYVYQYATGISAATALSKQILEEGEPAVKRYLEFL
KSGSSDYPIEVLKKAGVDMTKAEPVQEAMNVFEEKLNELEELLNK

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=968012 MKY17_RS06535 WP_339201529.1 1361653..1363470(+) (pepF) [Peribacillus sp. FSL P2-0133]
ATGGCACAGGAAACAAAAGCGAATACATTACCTTCAAGAAGTGAAATAGCTCCTGAAGATACTTGGAGACTGGAAGATAT
CTTCGCAACCGAGGAAGATTGGGAAGCTGCCTTCAAAGCGGTAAAAGAAGACCTCAAGAAAGCGGAGGGACATAAAGGGA
CGTTGGGAGAAAGCGCAGAAAAATTATTTGCGGCCCTTCAACTCCAAGATGAGGTATTCGAGAAGCTAGGGAAAGTTTAT
TCTTATTCACATATGCGTAATGATCAAGATACAACCAATCCTTTTTATCAAGGGATGGAGGATCGGGCAAAAGCTTTATA
CGCCCAGGCAGCGGCTGCGTTTTCATTTATGGTTCCTGAACTATTGAGTATTGATGAAAACAAAGTGGAAGGGTTTTTGG
AAGAAAAAGAAGATCTGAAATTATACAAACATTCTTTAGAGGAAATTAATCTTCAGAGACCCCATATCTTATCTGCAGAG
CAGGAAGAATTATTGGCGCAAGCATCAGAAGTACTTGATGCATCGGGCAATACTTTCGGAATGCTTAACAATGCCGATTT
GAAATTCCCGACCATCAAGGATGAAGAGGGAAATGAAGTGGAAATTACTCACGGAAGGTATATCAGTTTTCTTGAGAGTG
AAGATCGCCGTGTACGTGAGGAGGCATTTAAAGGGGTATACAGCAAGTATGGAGAGTTCCGTAATACATTTGCTTCAACC
CTGTCAGGTGAGGTGAAAAACCACAACTTCAATGCCACGGTTCGAAAATATGAATCAGCACGCCAAGCGGCGTTAAGTAA
TAATAACATTCCGGAGACCGTATACGATAATCTCGTTAAAACGGTCAATGACAACTTGCCATTACTGCACCGTTATCTTG
ATTTACGTAAAAAAGTACTGAAATTAGATGAACTTCATATGTACGATCTATTCACTCCTCTTGTTAAAGAAGTGAAGATG
GAAGTGACATATGACGATGCCAAAGATTATGTCCTTAAAGGTCTTGCTCCGCTTGGGGAGGACTATTTGAACGTTTTGAA
AGAGGGATTTGAAAACCGTTGGGTCGATGTGCATGAAAACAAAGGGAAACGAAGCGGTGCCTATTCTTCTGGTACATATG
GGACGAATCCTTATATTTTAATGAACTGGCAAAATAACGTCAATAACTTATTCACGCTCGTTCATGAATTTGGGCATTCG
GTTCATAGCTACTATACACGTAAATATCAGCCATATCCATACGGGAATTATTCCATATTTGTAGCGGAAGTTGCATCAAC
TTGTAATGAAAACTTGTTGAACGATTATTTACTGAATTCAATCGAAGATGAAAAGAAACGCATCTATTTATTGAATCATT
ACCTGGAAGGTTTCCGCGGCACATTGTTCCGGCAAACGATGTTTGCAGAGTTTGAACATACGATTCATTTAAAAGCTCAA
AATGGGGAAGCGTTGACAGCGGATATGCTTACTAAGGAATATTATGAGCTGAACAAGAAATACTTTGGAGAGAACGTGAC
CATTGATGAAGAAATCGGTTTGGAATGGGCGCGCATTCCACACTTCTACTATAATTACTATGTTTATCAATATGCAACTG
GAATCAGTGCAGCAACAGCATTAAGCAAGCAAATCCTTGAAGAAGGAGAGCCTGCTGTCAAAAGGTATCTGGAGTTCTTG
AAGTCAGGAAGTTCCGATTATCCGATTGAAGTGCTCAAAAAGGCTGGCGTCGATATGACTAAAGCCGAACCTGTACAAGA
AGCCATGAATGTATTCGAAGAAAAATTAAATGAGTTGGAAGAGCTTTTGAATAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.168

98.182

0.493


Multiple sequence alignment