Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   MKY10_RS19020 Genome accession   NZ_CP150253
Coordinates   3627672..3628829 (-) Length   385 a.a.
NCBI ID   WP_339225980.1    Uniprot ID   -
Organism   Bacillus sp. FSL P4-0290     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3622672..3633829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY10_RS18990 (MKY10_18990) - 3622925..3623344 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  MKY10_RS18995 (MKY10_18995) comFC 3623418..3624140 (-) 723 WP_003227991.1 comF operon protein ComFC Machinery gene
  MKY10_RS19000 (MKY10_19000) comFB 3624104..3624400 (-) 297 WP_003227989.1 late competence protein ComFB -
  MKY10_RS19005 (MKY10_19005) comFA 3624460..3625851 (-) 1392 WP_003243962.1 ATP-dependent helicase ComFA Machinery gene
  MKY10_RS19010 (MKY10_19010) - 3625957..3626802 (-) 846 WP_003244125.1 DegV family protein -
  MKY10_RS19015 (MKY10_19015) degU 3626900..3627589 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  MKY10_RS19020 (MKY10_19020) degS 3627672..3628829 (-) 1158 WP_339225980.1 two-component sensor histidine kinase DegS Regulator
  MKY10_RS19025 (MKY10_19025) - 3629046..3629699 (+) 654 WP_003227979.1 YigZ family protein -
  MKY10_RS19030 (MKY10_19030) tagV 3629699..3630874 (+) 1176 WP_015251114.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  MKY10_RS19035 (MKY10_19035) - 3630948..3632024 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  MKY10_RS19040 (MKY10_19040) - 3632169..3633362 (-) 1194 WP_072692828.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 45017.86 Da        Isoelectric Point: 6.2957

>NTDB_id=967990 MKY10_RS19020 WP_339225980.1 3627672..3628829(-) (degS) [Bacillus sp. FSL P4-0290]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSEFEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=967990 MKY10_RS19020 WP_339225980.1 3627672..3628829(-) (degS) [Bacillus sp. FSL P4-0290]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATCATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATTTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

99.74

100

0.997


Multiple sequence alignment