Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MKY10_RS13960 Genome accession   NZ_CP150253
Coordinates   2689107..2689682 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. FSL P4-0290     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2684107..2694682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY10_RS13935 (MKY10_13935) mobB 2684503..2685024 (-) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MKY10_RS13940 (MKY10_13940) glp 2684985..2686277 (-) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  MKY10_RS13945 (MKY10_13945) - 2686295..2687314 (-) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  MKY10_RS13950 (MKY10_13950) - 2687365..2687964 (-) 600 WP_015252185.1 molybdenum cofactor guanylyltransferase -
  MKY10_RS13955 (MKY10_13955) cse15 2688101..2689066 (+) 966 WP_048654871.1 spore protein Cse15 -
  MKY10_RS13960 (MKY10_13960) rok 2689107..2689682 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  MKY10_RS13965 (MKY10_13965) ykuV 2690148..2690594 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  MKY10_RS13970 (MKY10_13970) ahpA 2690666..2691208 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  MKY10_RS13975 (MKY10_13975) mscT 2691445..2692248 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  MKY10_RS13980 (MKY10_13980) - 2692285..2692530 (-) 246 WP_003232382.1 YkuS family protein -
  MKY10_RS13985 (MKY10_13985) - 2692592..2693716 (-) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  MKY10_RS13990 (MKY10_13990) dapD 2693786..2694496 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=967976 MKY10_RS13960 WP_003232378.1 2689107..2689682(-) (rok) [Bacillus sp. FSL P4-0290]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=967976 MKY10_RS13960 WP_003232378.1 2689107..2689682(-) (rok) [Bacillus sp. FSL P4-0290]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment