Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MKY10_RS09630 Genome accession   NZ_CP150253
Coordinates   1798238..1799041 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus sp. FSL P4-0290     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1793238..1804041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY10_RS09610 (MKY10_09610) - 1793348..1794193 (+) 846 WP_003230264.1 TlyA family RNA methyltransferase -
  MKY10_RS09615 (MKY10_09615) argR 1794291..1794740 (+) 450 WP_003230265.1 arginine repressor ArgR -
  MKY10_RS09620 (MKY10_09620) recN 1794777..1796507 (+) 1731 WP_003230267.1 DNA repair protein RecN Machinery gene
  MKY10_RS09625 (MKY10_09625) spoIVB 1796682..1797962 (+) 1281 WP_015251736.1 SpoIVB peptidase -
  MKY10_RS09630 (MKY10_09630) spo0A 1798238..1799041 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  MKY10_RS09635 (MKY10_09635) - 1799505..1800623 (-) 1119 WP_015251737.1 NADH-dependent flavin oxidoreductase -
  MKY10_RS09640 (MKY10_09640) - 1800696..1800848 (-) 153 WP_122060483.1 hypothetical protein -
  MKY10_RS09645 (MKY10_09645) - 1801156..1801452 (+) 297 WP_014480225.1 hypothetical protein -
  MKY10_RS09650 (MKY10_09650) - 1801472..1802092 (+) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  MKY10_RS09655 (MKY10_09655) - 1802171..1802902 (+) 732 WP_046160572.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=967969 MKY10_RS09630 WP_003226427.1 1798238..1799041(+) (spo0A) [Bacillus sp. FSL P4-0290]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=967969 MKY10_RS09630 WP_003226427.1 1798238..1799041(+) (spo0A) [Bacillus sp. FSL P4-0290]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCAGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGTCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCTCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGTCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment