Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NYE20_RS08070 Genome accession   NZ_CP150252
Coordinates   1506565..1507149 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus sp. FSL R5-0416     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1501565..1512149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE20_RS08040 (NYE20_08040) dapD 1501752..1502462 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NYE20_RS08045 (NYE20_08045) - 1502532..1503656 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  NYE20_RS08050 (NYE20_08050) - 1503718..1503963 (+) 246 WP_003232382.1 YkuS family protein -
  NYE20_RS08055 (NYE20_08055) mscT 1504000..1504803 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NYE20_RS08060 (NYE20_08060) ahpA 1505040..1505582 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NYE20_RS08065 (NYE20_08065) ykuV 1505653..1506099 (+) 447 WP_128740301.1 thiol-disulfide oxidoreductase YkuV -
  NYE20_RS08070 (NYE20_08070) rok 1506565..1507149 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  NYE20_RS08075 (NYE20_08075) cse15 1507190..1508155 (-) 966 WP_021479381.1 spore protein Cse15 -
  NYE20_RS08080 (NYE20_08080) - 1508292..1508891 (+) 600 WP_339184938.1 molybdenum cofactor guanylyltransferase -
  NYE20_RS08085 (NYE20_08085) - 1508942..1509961 (+) 1020 WP_041335765.1 molybdopterin-synthase adenylyltransferase MoeB -
  NYE20_RS08090 (NYE20_08090) glp 1509979..1511271 (+) 1293 WP_021479378.1 gephyrin-like molybdotransferase Glp -
  NYE20_RS08095 (NYE20_08095) mobB 1511232..1511753 (+) 522 WP_014479673.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=967871 NYE20_RS08070 WP_014113628.1 1506565..1507149(+) (rok) [Bacillus sp. FSL R5-0416]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=967871 NYE20_RS08070 WP_014113628.1 1506565..1507149(+) (rok) [Bacillus sp. FSL R5-0416]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment