Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NYE20_RS04620 Genome accession   NZ_CP150252
Coordinates   901912..902706 (+) Length   264 a.a.
NCBI ID   WP_064671928.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0416     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896912..907706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE20_RS04590 (NYE20_04590) - 897750..898781 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  NYE20_RS04595 (NYE20_04595) - 898896..899777 (+) 882 WP_161621441.1 PhzF family phenazine biosynthesis isomerase -
  NYE20_RS04600 (NYE20_04600) - 899865..900449 (+) 585 WP_161621442.1 nitroreductase -
  NYE20_RS04605 (NYE20_04605) - 900488..900679 (-) 192 WP_003233561.1 YfhD family protein -
  NYE20_RS04610 (NYE20_04610) - 900746..900856 (-) 111 WP_003223230.1 YfhE family protein -
  NYE20_RS04615 (NYE20_04615) - 900911..901822 (-) 912 WP_161621443.1 TIGR01777 family oxidoreductase -
  NYE20_RS04620 (NYE20_04620) recX 901912..902706 (+) 795 WP_064671928.1 recombination regulator RecX Regulator
  NYE20_RS04625 (NYE20_04625) - 902708..903022 (+) 315 WP_003244592.1 YfhH family protein -
  NYE20_RS04630 (NYE20_04630) - 903165..904360 (+) 1196 Protein_862 MFS transporter -
  NYE20_RS04635 (NYE20_04635) - 904392..904544 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NYE20_RS04640 (NYE20_04640) - 904669..904938 (+) 270 WP_003243789.1 YfhJ family protein -
  NYE20_RS04645 (NYE20_04645) - 905083..905601 (+) 519 WP_161621444.1 SH3 domain-containing protein -
  NYE20_RS04650 (NYE20_04650) spdL 905686..906003 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  NYE20_RS04655 (NYE20_04655) ephM 906005..906865 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31051.32 Da        Isoelectric Point: 6.5251

>NTDB_id=967853 NYE20_RS04620 WP_064671928.1 901912..902706(+) (recX) [Bacillus sp. FSL R5-0416]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDYLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=967853 NYE20_RS04620 WP_064671928.1 901912..902706(+) (recX) [Bacillus sp. FSL R5-0416]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACTATTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment