Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | NYE20_RS00245 | Genome accession | NZ_CP150252 |
| Coordinates | 44361..44651 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus sp. FSL R5-0416 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39361..49651
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE20_RS00205 (NYE20_00205) | darA | 39384..39713 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| NYE20_RS00210 (NYE20_00210) | - | 39726..40166 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| NYE20_RS00215 (NYE20_00215) | holB | 40178..41167 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| NYE20_RS00220 (NYE20_00220) | ricT | 41170..41997 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| NYE20_RS00225 (NYE20_00225) | yabA | 42012..42371 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| NYE20_RS00230 (NYE20_00230) | - | 42430..43173 (+) | 744 | WP_161621072.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| NYE20_RS00235 (NYE20_00235) | - | 43160..43459 (+) | 300 | WP_103804198.1 | GIY-YIG nuclease family protein | - |
| NYE20_RS00240 (NYE20_00240) | rsmI | 43434..44312 (+) | 879 | WP_087614199.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| NYE20_RS00245 (NYE20_00245) | abrB | 44361..44651 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| NYE20_RS00250 (NYE20_00250) | metG | 45146..47140 (+) | 1995 | WP_015253011.1 | methionine--tRNA ligase | - |
| NYE20_RS00255 (NYE20_00255) | - | 47219..47986 (+) | 768 | WP_038827637.1 | TatD family hydrolase | - |
| NYE20_RS00260 (NYE20_00260) | - | 48142..49455 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=967842 NYE20_RS00245 WP_003226760.1 44361..44651(-) (abrB) [Bacillus sp. FSL R5-0416]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=967842 NYE20_RS00245 WP_003226760.1 44361..44651(-) (abrB) [Bacillus sp. FSL R5-0416]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |