Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NYE53_RS12320 | Genome accession | NZ_CP150251 |
| Coordinates | 2423921..2424958 (-) | Length | 345 a.a. |
| NCBI ID | WP_327829298.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0523 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2418921..2429958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE53_RS12270 (NYE53_12270) | tasA | 2419018..2419803 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| NYE53_RS12275 (NYE53_12275) | - | 2419868..2420440 (-) | 573 | WP_003246088.1 | signal peptidase I | - |
| NYE53_RS12280 (NYE53_12280) | tapA | 2420424..2421185 (-) | 762 | WP_339244943.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NYE53_RS12285 (NYE53_12285) | - | 2421456..2421782 (+) | 327 | WP_339244945.1 | YqzG/YhdC family protein | - |
| NYE53_RS12290 (NYE53_12290) | - | 2421824..2422003 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| NYE53_RS12295 (NYE53_12295) | comGG | 2422075..2422449 (-) | 375 | WP_339244947.1 | ComG operon protein ComGG | Machinery gene |
| NYE53_RS12300 (NYE53_12300) | comGF | 2422450..2422833 (-) | 384 | WP_106073563.1 | ComG operon protein ComGF | Machinery gene |
| NYE53_RS12305 (NYE53_12305) | comGE | 2422859..2423206 (-) | 348 | WP_327829299.1 | ComG operon protein 5 | Machinery gene |
| NYE53_RS12310 (NYE53_12310) | comGD | 2423190..2423621 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| NYE53_RS12315 (NYE53_12315) | comGC | 2423611..2423907 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NYE53_RS12320 (NYE53_12320) | comGB | 2423921..2424958 (-) | 1038 | WP_327829298.1 | comG operon protein ComGB | Machinery gene |
| NYE53_RS12325 (NYE53_12325) | comGA | 2424945..2426015 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| NYE53_RS12330 (NYE53_12330) | - | 2426226..2426423 (-) | 198 | WP_327829297.1 | hypothetical protein | - |
| NYE53_RS12335 (NYE53_12335) | corA | 2426425..2427378 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| NYE53_RS12340 (NYE53_12340) | - | 2427521..2428849 (+) | 1329 | WP_088467262.1 | hemolysin family protein | - |
| NYE53_RS12345 (NYE53_12345) | rsbRD | 2428902..2429738 (-) | 837 | WP_327829296.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39676.09 Da Isoelectric Point: 9.6257
>NTDB_id=967808 NYE53_RS12320 WP_327829298.1 2423921..2424958(-) (comGB) [Bacillus sp. FSL R5-0523]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQMKRVLRYPIFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFALF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILVVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQMKRVLRYPIFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFALF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILVVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=967808 NYE53_RS12320 WP_327829298.1 2423921..2424958(-) (comGB) [Bacillus sp. FSL R5-0523]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAAATGAAAAGAGTGCTGCGCTATCCGATTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTATTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTAGTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAAATGAAAAGAGTGCTGCGCTATCCGATTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTATTT
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTAGTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.214 |
93.623 |
0.91 |