Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NYE53_RS07760 Genome accession   NZ_CP150251
Coordinates   1488772..1489356 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus sp. FSL R5-0523     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1483772..1494356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE53_RS07730 (NYE53_07730) dapD 1483958..1484668 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NYE53_RS07735 (NYE53_07735) - 1484738..1485862 (+) 1125 WP_339248044.1 N-acetyldiaminopimelate deacetylase -
  NYE53_RS07740 (NYE53_07740) - 1485924..1486169 (+) 246 WP_003232382.1 YkuS family protein -
  NYE53_RS07745 (NYE53_07745) mscT 1486206..1487009 (-) 804 WP_133954342.1 small-conductance mechanosensitive channel protein MscT -
  NYE53_RS07750 (NYE53_07750) ahpA 1487246..1487788 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NYE53_RS07755 (NYE53_07755) ykuV 1487860..1488306 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  NYE53_RS07760 (NYE53_07760) rok 1488772..1489356 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  NYE53_RS07765 (NYE53_07765) cse15 1489397..1490362 (-) 966 WP_339248047.1 spore protein Cse15 -
  NYE53_RS07770 (NYE53_07770) - 1490499..1491098 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  NYE53_RS07775 (NYE53_07775) - 1491149..1492168 (+) 1020 WP_339248050.1 molybdopterin-synthase adenylyltransferase MoeB -
  NYE53_RS07780 (NYE53_07780) glp 1492186..1493478 (+) 1293 WP_339248052.1 gephyrin-like molybdotransferase Glp -
  NYE53_RS07785 (NYE53_07785) mobB 1493439..1493960 (+) 522 WP_049139878.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=967792 NYE53_RS07760 WP_014113628.1 1488772..1489356(+) (rok) [Bacillus sp. FSL R5-0523]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=967792 NYE53_RS07760 WP_014113628.1 1488772..1489356(+) (rok) [Bacillus sp. FSL R5-0523]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAACTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment