Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NYE53_RS07660 Genome accession   NZ_CP150251
Coordinates   1472895..1473359 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. FSL R5-0523     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1467895..1478359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE53_RS07640 (NYE53_07640) kinA 1468362..1470182 (+) 1821 WP_106610737.1 sporulation histidine kinase KinA -
  NYE53_RS07645 (NYE53_07645) - 1470192..1471373 (-) 1182 WP_101502064.1 aminotransferase A -
  NYE53_RS07650 (NYE53_07650) - 1471575..1471736 (-) 162 WP_014476654.1 hypothetical protein -
  NYE53_RS07655 (NYE53_07655) cheV 1471940..1472851 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  NYE53_RS07660 (NYE53_07660) kre 1472895..1473359 (-) 465 WP_003232406.1 YkyB family protein Regulator
  NYE53_RS07665 (NYE53_07665) - 1473485..1474777 (-) 1293 WP_339248034.1 MFS transporter -
  NYE53_RS07670 (NYE53_07670) - 1474853..1475347 (-) 495 WP_339248509.1 L,D-transpeptidase family protein -
  NYE53_RS07675 (NYE53_07675) - 1475404..1476264 (-) 861 WP_339248036.1 metallophosphoesterase -
  NYE53_RS07680 (NYE53_07680) fadH 1476407..1477171 (+) 765 WP_014476659.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=967791 NYE53_RS07660 WP_003232406.1 1472895..1473359(-) (kre) [Bacillus sp. FSL R5-0523]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=967791 NYE53_RS07660 WP_003232406.1 1472895..1473359(-) (kre) [Bacillus sp. FSL R5-0523]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTTTTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment