Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NYE53_RS04640 Genome accession   NZ_CP150251
Coordinates   918810..919604 (+) Length   264 a.a.
NCBI ID   WP_339247525.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0523     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 913810..924604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE53_RS04610 (NYE53_04610) - 914649..915680 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  NYE53_RS04615 (NYE53_04615) - 915795..916676 (+) 882 WP_339247518.1 PhzF family phenazine biosynthesis isomerase -
  NYE53_RS04620 (NYE53_04620) - 916764..917348 (+) 585 WP_339247521.1 nitroreductase -
  NYE53_RS04625 (NYE53_04625) - 917387..917578 (-) 192 WP_003233561.1 YfhD family protein -
  NYE53_RS04630 (NYE53_04630) - 917645..917755 (-) 111 WP_003223230.1 YfhE family protein -
  NYE53_RS04635 (NYE53_04635) - 917810..918721 (-) 912 WP_339247523.1 TIGR01777 family oxidoreductase -
  NYE53_RS04640 (NYE53_04640) recX 918810..919604 (+) 795 WP_339247525.1 recombination regulator RecX Regulator
  NYE53_RS04645 (NYE53_04645) - 919606..919920 (+) 315 WP_003244592.1 YfhH family protein -
  NYE53_RS04650 (NYE53_04650) - 920063..921256 (+) 1194 WP_003243500.1 MFS transporter -
  NYE53_RS04655 (NYE53_04655) - 921288..921440 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NYE53_RS04660 (NYE53_04660) - 921565..921834 (+) 270 WP_251218338.1 YfhJ family protein -
  NYE53_RS04665 (NYE53_04665) - 921979..922497 (+) 519 WP_133953891.1 SH3 domain-containing protein -
  NYE53_RS04670 (NYE53_04670) spdL 922582..922914 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  NYE53_RS04675 (NYE53_04675) ephM 922901..923761 (+) 861 WP_339247528.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31031.25 Da        Isoelectric Point: 6.6687

>NTDB_id=967774 NYE53_RS04640 WP_339247525.1 918810..919604(+) (recX) [Bacillus sp. FSL R5-0523]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSFRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=967774 NYE53_RS04640 WP_339247525.1 918810..919604(+) (recX) [Bacillus sp. FSL R5-0523]
ATGCCGTTTATTACAAAAATATCAACACAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTTTCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCACTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCCGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment