Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACKZ7V_RS06405 Genome accession   NZ_CP176566
Coordinates   1299845..1300519 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain IMT37083     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1294845..1305519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7V_RS06380 (ACKZ7V_06380) - 1295062..1296129 (+) 1068 WP_000980139.1 membrane protein -
  ACKZ7V_RS06385 (ACKZ7V_06385) - 1296280..1297323 (+) 1044 WP_111762008.1 alpha/beta hydrolase -
  ACKZ7V_RS06390 (ACKZ7V_06390) - 1297652..1298080 (+) 429 WP_000198500.1 hypothetical protein -
  ACKZ7V_RS06395 (ACKZ7V_06395) - 1298287..1298793 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  ACKZ7V_RS06400 (ACKZ7V_06400) graX 1298906..1299829 (+) 924 WP_000802957.1 auxiliary protein GraX/ApsX -
  ACKZ7V_RS06405 (ACKZ7V_06405) braR 1299845..1300519 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  ACKZ7V_RS06410 (ACKZ7V_06410) graS 1300512..1301552 (+) 1041 WP_111762009.1 histidine kinase GraS/ApsS -
  ACKZ7V_RS06415 (ACKZ7V_06415) vraF 1301696..1302457 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  ACKZ7V_RS06420 (ACKZ7V_06420) vraG 1302447..1304336 (+) 1890 WP_111762010.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=967658 ACKZ7V_RS06405 WP_001166496.1 1299845..1300519(+) (braR) [Staphylococcus aureus strain IMT37083]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=967658 ACKZ7V_RS06405 WP_001166496.1 1299845..1300519(+) (braR) [Staphylococcus aureus strain IMT37083]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACCGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATTTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397