Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACKZ7V_RS01960 Genome accession   NZ_CP176566
Coordinates   413923..414768 (+) Length   281 a.a.
NCBI ID   WP_111761889.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IMT37083     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 408923..419768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7V_RS01945 (ACKZ7V_01945) - 409191..411032 (-) 1842 WP_148843697.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  ACKZ7V_RS01950 (ACKZ7V_01950) metC 411001..412161 (-) 1161 WP_111761888.1 cystathionine beta-lyase MetC -
  ACKZ7V_RS01955 (ACKZ7V_01955) - 412158..413261 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  ACKZ7V_RS01960 (ACKZ7V_01960) spo0J 413923..414768 (+) 846 WP_111761889.1 ParB/RepB/Spo0J family partition protein Regulator
  ACKZ7V_RS01965 (ACKZ7V_01965) - 414922..415803 (+) 882 WP_111761890.1 mechanosensitive ion channel family protein -
  ACKZ7V_RS01970 (ACKZ7V_01970) - 415833..416036 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACKZ7V_RS01975 (ACKZ7V_01975) ychF 416048..417145 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  ACKZ7V_RS01980 (ACKZ7V_01980) - 417231..417422 (-) 192 WP_001052483.1 hypothetical protein -
  ACKZ7V_RS01985 (ACKZ7V_01985) rpsF 417666..417962 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACKZ7V_RS01990 (ACKZ7V_01990) ssbA 417983..418486 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACKZ7V_RS01995 (ACKZ7V_01995) rpsR 418538..418780 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32811.85 Da        Isoelectric Point: 10.0000

>NTDB_id=967644 ACKZ7V_RS01960 WP_111761889.1 413923..414768(+) (spo0J) [Staphylococcus aureus strain IMT37083]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETEKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=967644 ACKZ7V_RS01960 WP_111761889.1 413923..414768(+) (spo0J) [Staphylococcus aureus strain IMT37083]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTACAAGGCTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAATCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGAAAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381