Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY78_RS07755 Genome accession   NZ_CP150248
Coordinates   1494841..1495794 (-) Length   317 a.a.
NCBI ID   WP_186869614.1    Uniprot ID   -
Organism   Ornithinibacillus sp. FSL M8-0202     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1489841..1500794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY78_RS07735 (MKY78_07735) - 1490962..1491651 (-) 690 WP_339217190.1 SurA N-terminal domain-containing protein -
  MKY78_RS07740 (MKY78_07740) - 1491830..1492771 (-) 942 WP_339217191.1 siderophore ABC transporter substrate-binding protein -
  MKY78_RS07745 (MKY78_07745) - 1493152..1493907 (-) 756 WP_186869616.1 ABC transporter ATP-binding protein -
  MKY78_RS07750 (MKY78_07750) - 1493901..1494851 (-) 951 WP_186869615.1 iron chelate uptake ABC transporter family permease subunit -
  MKY78_RS07755 (MKY78_07755) ceuB 1494841..1495794 (-) 954 WP_186869614.1 ABC transporter permease Machinery gene
  MKY78_RS07760 (MKY78_07760) - 1495988..1496707 (-) 720 WP_211742332.1 DsbA family oxidoreductase -
  MKY78_RS07765 (MKY78_07765) - 1496785..1497627 (-) 843 WP_339217192.1 MBL fold metallo-hydrolase -
  MKY78_RS07770 (MKY78_07770) fni 1497839..1498897 (-) 1059 WP_339217193.1 type 2 isopentenyl-diphosphate Delta-isomerase -
  MKY78_RS07775 (MKY78_07775) - 1499037..1499576 (+) 540 WP_339217194.1 HD domain-containing protein -
  MKY78_RS07780 (MKY78_07780) - 1499697..1500302 (+) 606 WP_339217195.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34727.92 Da        Isoelectric Point: 9.9459

>NTDB_id=967627 MKY78_RS07755 WP_186869614.1 1494841..1495794(-) (ceuB) [Ornithinibacillus sp. FSL M8-0202]
MKLRYLVIVLIVLSIVSVFIGVSDVTPLDLFSLTEDQAQILLVSRLPRLVSILIAGMSMSVAGLIMQQLSRNKFVSPTTA
GTLDSARLGVLVSLLVFTAASPLQRILVSFAFALIGTFIFMKLLDRIKFKDAIFIPLVGLMFGNIISSMATFLAYKNDLI
QNMSSWMQGDFSMIMSGNYEAIYISIPILVLAFLYANKFTIAGMGEDFSKNLGLNYRQVVNIGLVVVALVTASVVLTVGV
IPFLGLIIPNIVAIYQGDHLKKTLLHTAFLGAIFVLICDIVGRTIIYPYEIPISLTVGVIGSAIFIYLLLRRKKYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=967627 MKY78_RS07755 WP_186869614.1 1494841..1495794(-) (ceuB) [Ornithinibacillus sp. FSL M8-0202]
ATGAAATTACGTTACTTGGTTATCGTGCTTATTGTTTTGTCTATTGTATCGGTTTTCATCGGAGTTTCCGATGTTACACC
ACTAGACTTGTTTAGTCTGACAGAAGATCAGGCTCAAATTCTATTAGTTAGTAGACTGCCAAGGTTAGTAAGTATCTTAA
TTGCGGGTATGAGTATGAGTGTTGCAGGGCTTATTATGCAACAGCTTAGTAGAAACAAGTTTGTTTCTCCAACTACTGCA
GGTACATTGGATTCTGCTAGATTAGGTGTTCTAGTTTCATTATTAGTATTCACTGCGGCTAGTCCACTACAAAGAATTCT
AGTATCCTTTGCTTTTGCATTAATTGGCACATTCATCTTCATGAAGCTACTAGACCGAATCAAATTTAAGGATGCTATTT
TTATTCCGTTAGTTGGGTTAATGTTTGGGAATATTATCAGCTCCATGGCTACGTTTCTTGCGTATAAGAATGATTTGATA
CAAAACATGTCTTCTTGGATGCAAGGCGATTTTTCCATGATTATGAGTGGGAATTATGAGGCTATTTATATTAGTATTCC
GATTTTAGTGTTAGCGTTCCTTTACGCAAATAAATTCACTATAGCCGGTATGGGTGAGGATTTCTCAAAGAATCTAGGGC
TTAATTATCGGCAAGTAGTCAATATTGGATTGGTTGTTGTGGCACTTGTAACAGCATCTGTCGTACTAACCGTTGGTGTG
ATACCATTTCTAGGATTAATTATTCCGAATATCGTGGCGATCTATCAAGGTGATCATTTAAAGAAAACACTACTACACAC
GGCATTTCTTGGTGCCATCTTTGTACTGATCTGTGACATTGTTGGTCGAACGATTATTTATCCATATGAAATTCCAATTA
GCCTAACGGTTGGTGTAATAGGTAGTGCGATATTTATCTACCTATTATTAAGGAGAAAGAAATATGGCCTATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.633

99.685

0.505

Multiple sequence alignment