Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACKZ7S_RS09595 Genome accession   NZ_CP176565
Coordinates   1943943..1944683 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain V0353     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1938943..1949683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7S_RS09570 (ACKZ7S_09570) hemH 1939820..1940743 (-) 924 WP_162636611.1 ferrochelatase -
  ACKZ7S_RS09575 (ACKZ7S_09575) hemE 1940801..1941838 (-) 1038 WP_000233534.1 uroporphyrinogen decarboxylase -
  ACKZ7S_RS09580 (ACKZ7S_09580) - 1941828..1941914 (-) 87 WP_031875110.1 hypothetical protein -
  ACKZ7S_RS09585 (ACKZ7S_09585) traP 1942100..1942603 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  ACKZ7S_RS09590 (ACKZ7S_09590) ecsB 1942727..1943950 (-) 1224 WP_162636610.1 ABC transporter permease EcsB -
  ACKZ7S_RS09595 (ACKZ7S_09595) pptA 1943943..1944683 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  ACKZ7S_RS09600 (ACKZ7S_09600) - 1944817..1945239 (+) 423 WP_000004981.1 HIT family protein -
  ACKZ7S_RS09605 (ACKZ7S_09605) - 1945381..1945746 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  ACKZ7S_RS09610 (ACKZ7S_09610) - 1946478..1947035 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  ACKZ7S_RS09615 (ACKZ7S_09615) - 1947241..1948203 (+) 963 WP_162636609.1 foldase protein PrsA -
  ACKZ7S_RS09620 (ACKZ7S_09620) yhaM 1948324..1949265 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=967622 ACKZ7S_RS09595 WP_000216874.1 1943943..1944683(-) (pptA) [Staphylococcus aureus strain V0353]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=967622 ACKZ7S_RS09595 WP_000216874.1 1943943..1944683(-) (pptA) [Staphylococcus aureus strain V0353]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGTCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545