Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MKY78_RS02245 Genome accession   NZ_CP150248
Coordinates   442598..444412 (-) Length   604 a.a.
NCBI ID   WP_339215864.1    Uniprot ID   -
Organism   Ornithinibacillus sp. FSL M8-0202     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 437598..449412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY78_RS02210 (MKY78_02210) - 437621..438502 (-) 882 WP_339215856.1 RluA family pseudouridine synthase -
  MKY78_RS02215 (MKY78_02215) - 438522..439322 (-) 801 WP_186871358.1 NAD kinase -
  MKY78_RS02220 (MKY78_02220) - 439348..439956 (-) 609 WP_186871359.1 GTP pyrophosphokinase family protein -
  MKY78_RS02225 (MKY78_02225) - 440080..440649 (+) 570 WP_339215858.1 CYTH domain-containing protein -
  MKY78_RS02230 (MKY78_02230) - 440731..441111 (+) 381 WP_339215859.1 globin -
  MKY78_RS02235 (MKY78_02235) - 441126..442022 (+) 897 WP_339215861.1 ClpXP adapter SpxH family protein -
  MKY78_RS02240 (MKY78_02240) - 442341..442514 (+) 174 WP_339215862.1 hypothetical protein -
  MKY78_RS02245 (MKY78_02245) pepF 442598..444412 (-) 1815 WP_339215864.1 oligoendopeptidase F Regulator
  MKY78_RS02250 (MKY78_02250) - 444505..445698 (-) 1194 WP_339215865.1 competence protein CoiA family protein -
  MKY78_RS02255 (MKY78_02255) mecA 445778..446476 (-) 699 WP_339215866.1 adaptor protein MecA -
  MKY78_RS02260 (MKY78_02260) spxA 446821..447216 (-) 396 WP_186871367.1 transcriptional regulator SpxA -
  MKY78_RS02265 (MKY78_02265) - 447519..447860 (+) 342 WP_339215869.1 P-II family nitrogen regulator -
  MKY78_RS02270 (MKY78_02270) - 447889..449196 (+) 1308 WP_339215871.1 ammonium transporter -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 69554.90 Da        Isoelectric Point: 4.6877

>NTDB_id=967620 MKY78_RS02245 WP_339215864.1 442598..444412(-) (pepF) [Ornithinibacillus sp. FSL M8-0202]
MAKATKELQARSEVPVERTWRLEDIFETDAVWEEELNSLKNEIPKISEYKGKVAESADSLYNVLNLQDELSERLGKLFTY
AHMRYDQDTTNSFYQALNAKAENVLTFAQSSMSYLVPEILKMDEATIKTYLEEKEELKLYEHVLNEIIRQRKHVLGESEE
ALLAEASEALSNGSQTFGMLNNADLTFPTITNEKGEEVDLTHGRYVGFLESKDRRVRKEAFQAMYNTYGQFKNTFASTLS
GTVKSHNFNAKVRHYDSARQAALDNNNIPETVYDNLVEAVNERLPLLHRYGKLRKQILGVDEVHMYDMYTPLVQDVDMEI
PYEKAQEYVLESLKPLGEEYLEVIKEGFANRWIDVEENKGKRSGAYSSGAYGTNPYILLNWQDRVSDLFTLTHELGHSAH
SYFTRKFQPYRYGNYSIFVAEVASTANEALLNDYLLNNLNDEKQKLYILNHFLEGFRGTVFRQTMFAEFEHEIHKRAQAG
EALTADNLTEIYYELNKKYFGDEVVSDEEIGLEWARIPHFYYNYYVYQYATGYSAATALANKMLSGEEGAVGHYLDFLKS
GSSDYPIEVLKKAGVDMTSKQPILDALDVFEEKLTEMENLLLNK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=967620 MKY78_RS02245 WP_339215864.1 442598..444412(-) (pepF) [Ornithinibacillus sp. FSL M8-0202]
ATGGCAAAGGCAACAAAAGAACTTCAAGCAAGAAGTGAAGTACCGGTTGAAAGAACGTGGAGATTAGAGGATATCTTTGA
AACGGATGCCGTATGGGAAGAAGAGCTTAATAGTTTAAAGAATGAAATTCCTAAAATCTCAGAGTATAAAGGAAAGGTTG
CAGAATCTGCAGACTCTTTATATAACGTTCTAAACTTGCAAGATGAATTGTCAGAAAGACTTGGTAAGCTTTTTACATAT
GCACATATGCGTTATGATCAGGATACGACAAACTCATTTTATCAAGCATTGAATGCAAAAGCAGAGAATGTATTAACATT
TGCGCAAAGCTCTATGAGTTATTTAGTACCAGAGATTCTGAAGATGGATGAAGCAACGATAAAGACTTACCTGGAAGAGA
AAGAGGAGTTAAAGCTTTATGAACATGTGTTAAATGAAATTATTAGACAACGTAAACACGTATTAGGAGAGTCAGAAGAA
GCTCTTTTAGCAGAGGCGTCTGAAGCTTTATCTAATGGGTCACAAACGTTCGGTATGTTAAATAATGCAGATTTAACATT
CCCTACCATTACCAATGAAAAGGGAGAAGAAGTCGATCTAACACATGGTCGCTACGTAGGGTTCTTAGAATCAAAGGATC
GTCGAGTGCGAAAAGAAGCATTCCAAGCAATGTATAACACGTATGGACAATTCAAAAATACCTTTGCTTCTACACTAAGT
GGTACGGTTAAGTCGCATAATTTTAATGCGAAAGTTCGTCATTATGATTCAGCTAGACAGGCTGCGTTAGACAATAATAA
TATTCCGGAAACAGTATATGATAATCTGGTTGAAGCGGTTAATGAGAGATTACCGTTATTACACCGTTACGGAAAATTAC
GTAAACAAATACTAGGTGTGGATGAAGTGCATATGTATGATATGTACACACCATTAGTCCAAGATGTTGACATGGAAATC
CCATATGAGAAAGCACAAGAATATGTATTAGAAAGTCTTAAGCCTCTTGGAGAAGAATACTTAGAGGTCATTAAGGAAGG
CTTTGCTAATCGTTGGATTGATGTGGAAGAAAATAAAGGTAAGCGAAGTGGTGCATACTCTTCAGGTGCTTATGGTACGA
ACCCATACATTTTATTGAACTGGCAAGACCGTGTGAGTGACCTGTTTACATTAACACATGAATTAGGACACTCAGCACAT
AGTTATTTCACAAGGAAGTTCCAACCATATCGTTATGGTAACTATTCCATCTTTGTAGCGGAAGTGGCATCTACAGCGAA
TGAAGCATTACTTAACGACTACTTATTAAACAATCTTAACGATGAAAAACAAAAGCTATATATTTTAAATCATTTCTTAG
AAGGATTCCGTGGTACTGTTTTCCGTCAAACCATGTTTGCTGAATTCGAGCATGAGATTCATAAACGCGCACAAGCAGGG
GAAGCACTAACAGCAGATAACTTAACAGAAATTTATTATGAGCTAAATAAAAAATATTTCGGTGATGAAGTGGTATCAGA
TGAAGAAATCGGTCTAGAGTGGGCAAGAATTCCTCACTTCTACTACAACTACTATGTTTATCAATATGCTACTGGGTACT
CTGCTGCGACAGCATTAGCTAATAAAATGCTATCAGGGGAAGAAGGAGCAGTTGGTCATTACCTAGATTTCTTGAAATCT
GGAAGTAGTGATTATCCGATTGAAGTATTGAAAAAAGCTGGTGTCGATATGACATCGAAACAACCAATCTTAGATGCATT
AGATGTATTTGAAGAAAAACTAACAGAGATGGAGAATCTTCTGTTAAATAAATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(209-587)

Oligopeptidase F (Peptidase_M3_N)

(118-187)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.746

97.848

0.487

Multiple sequence alignment