Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   ACKZ7S_RS03660 Genome accession   NZ_CP176565
Coordinates   730075..730749 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain V0353     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 725075..735749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7S_RS03635 (ACKZ7S_03635) - 725297..726364 (+) 1068 WP_000980139.1 membrane protein -
  ACKZ7S_RS03640 (ACKZ7S_03640) - 726515..727558 (+) 1044 WP_001030757.1 alpha/beta hydrolase -
  ACKZ7S_RS03645 (ACKZ7S_03645) - 727887..728315 (+) 429 WP_000198501.1 hypothetical protein -
  ACKZ7S_RS03650 (ACKZ7S_03650) - 728517..729023 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  ACKZ7S_RS03655 (ACKZ7S_03655) graX 729136..730059 (+) 924 WP_162636185.1 auxiliary protein GraX/ApsX -
  ACKZ7S_RS03660 (ACKZ7S_03660) braR 730075..730749 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  ACKZ7S_RS03665 (ACKZ7S_03665) graS 730742..731782 (+) 1041 WP_162636186.1 histidine kinase GraS/ApsS -
  ACKZ7S_RS03670 (ACKZ7S_03670) vraF 731926..732687 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  ACKZ7S_RS03675 (ACKZ7S_03675) vraG 732677..734566 (+) 1890 WP_000143625.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=967566 ACKZ7S_RS03660 WP_001166496.1 730075..730749(+) (braR) [Staphylococcus aureus strain V0353]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=967566 ACKZ7S_RS03660 WP_001166496.1 730075..730749(+) (braR) [Staphylococcus aureus strain V0353]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATTTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397