Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   MKX44_RS17670 Genome accession   NZ_CP150246
Coordinates   3357181..3357321 (-) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus sp. FSL M8-0359     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3352181..3362321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX44_RS17645 (MKX44_17645) - 3352425..3352814 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  MKX44_RS17650 (MKX44_17650) comA 3352831..3353469 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  MKX44_RS17655 (MKX44_17655) comP 3353556..3355904 (-) 2349 WP_339225298.1 ATP-binding protein Regulator
  MKX44_RS17660 (MKX44_17660) comX 3355944..3356108 (-) 165 WP_011198251.1 competence pheromone ComX -
  MKX44_RS17665 (MKX44_17665) - 3356123..3356992 (-) 870 WP_011198252.1 polyprenyl synthetase family protein -
  MKX44_RS17670 (MKX44_17670) degQ 3357181..3357321 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  MKX44_RS17675 (MKX44_17675) - 3357807..3358154 (+) 348 WP_009329512.1 hypothetical protein -
  MKX44_RS17680 (MKX44_17680) - 3358197..3359417 (-) 1221 WP_003184864.1 HDOD domain-containing protein -
  MKX44_RS17685 (MKX44_17685) - 3359596..3361065 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  MKX44_RS17690 (MKX44_17690) - 3361083..3361634 (-) 552 WP_003184868.1 isochorismatase family cysteine hydrolase -
  MKX44_RS17695 (MKX44_17695) - 3361819..3362220 (-) 402 WP_003184870.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=967528 MKX44_RS17670 WP_003184860.1 3357181..3357321(-) (degQ) [Bacillus sp. FSL M8-0359]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=967528 MKX44_RS17670 WP_003184860.1 3357181..3357321(-) (degQ) [Bacillus sp. FSL M8-0359]
GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGAGAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGATAAGTACACATATCTAAAAACCTCGTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652

Multiple sequence alignment