Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKX44_RS13580 | Genome accession | NZ_CP150246 |
| Coordinates | 2584667..2585002 (+) | Length | 111 a.a. |
| NCBI ID | WP_025804940.1 | Uniprot ID | A0AB37GFT9 |
| Organism | Bacillus sp. FSL M8-0359 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2579667..2590002
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKX44_RS13560 (MKX44_13560) | gcvT | 2580099..2581193 (-) | 1095 | WP_003183436.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKX44_RS13565 (MKX44_13565) | - | 2581786..2583465 (+) | 1680 | WP_003183439.1 | SNF2-related protein | - |
| MKX44_RS13570 (MKX44_13570) | - | 2583472..2584266 (+) | 795 | WP_003183441.1 | YqhG family protein | - |
| MKX44_RS13575 (MKX44_13575) | sinI | 2584457..2584633 (+) | 177 | WP_003183444.1 | anti-repressor SinI family protein | Regulator |
| MKX44_RS13580 (MKX44_13580) | sinR | 2584667..2585002 (+) | 336 | WP_025804940.1 | helix-turn-helix domain-containing protein | Regulator |
| MKX44_RS13585 (MKX44_13585) | - | 2585107..2585901 (-) | 795 | WP_003183447.1 | TasA family protein | - |
| MKX44_RS13590 (MKX44_13590) | - | 2585975..2586559 (-) | 585 | WP_003183449.1 | signal peptidase I | - |
| MKX44_RS13595 (MKX44_13595) | tapA | 2586556..2587284 (-) | 729 | WP_003183451.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKX44_RS13600 (MKX44_13600) | - | 2587594..2587881 (+) | 288 | WP_223307118.1 | YqzG/YhdC family protein | - |
| MKX44_RS13605 (MKX44_13605) | - | 2587905..2588087 (-) | 183 | WP_003183456.1 | YqzE family protein | - |
| MKX44_RS13610 (MKX44_13610) | comGG | 2588176..2588541 (-) | 366 | WP_003183459.1 | competence type IV pilus minor pilin ComGG | - |
| MKX44_RS13615 (MKX44_13615) | comGF | 2588554..2589042 (-) | 489 | WP_011201694.1 | competence type IV pilus minor pilin ComGF | - |
| MKX44_RS13620 (MKX44_13620) | comGE | 2588951..2589298 (-) | 348 | WP_009327907.1 | competence type IV pilus minor pilin ComGE | - |
| MKX44_RS13625 (MKX44_13625) | comGD | 2589282..2589719 (-) | 438 | WP_009327905.1 | competence type IV pilus minor pilin ComGD | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12991.60 Da Isoelectric Point: 5.9495
>NTDB_id=967512 MKX44_RS13580 WP_025804940.1 2584667..2585002(+) (sinR) [Bacillus sp. FSL M8-0359]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKRRQEKE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKRRQEKE
Nucleotide
Download Length: 336 bp
>NTDB_id=967512 MKX44_RS13580 WP_025804940.1 2584667..2585002(+) (sinR) [Bacillus sp. FSL M8-0359]
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAGAAG
ACAGGAAAAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAGAAG
ACAGGAAAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |