Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACJX3V_RS19125 Genome accession   NZ_CP176523
Coordinates   3858143..3858937 (-) Length   264 a.a.
NCBI ID   WP_004393110.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MEPW12     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3853143..3863937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJX3V_RS19105 - 3853527..3854534 (-) 1008 WP_014306163.1 ThiF family adenylyltransferase -
  ACJX3V_RS19110 - 3854766..3856184 (-) 1419 WP_207579588.1 sensor histidine kinase -
  ACJX3V_RS19115 - 3856181..3856393 (-) 213 WP_014306165.1 winged helix-turn-helix domain-containing protein -
  ACJX3V_RS19120 htrA 3856860..3858056 (-) 1197 WP_043867591.1 S1C family serine protease Regulator
  ACJX3V_RS19125 vicX 3858143..3858937 (-) 795 WP_004393110.1 MBL fold metallo-hydrolase Regulator
  ACJX3V_RS19130 - 3858952..3859791 (-) 840 WP_014306169.1 two-component system regulatory protein YycI -
  ACJX3V_RS19135 yycH 3859778..3861136 (-) 1359 WP_004393107.1 two-component system activity regulator YycH -
  ACJX3V_RS19140 walK 3861126..3862961 (-) 1836 WP_004393106.1 cell wall metabolism sensor histidine kinase WalK -
  ACJX3V_RS19145 walR 3862968..3863675 (-) 708 WP_004393104.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29144.22 Da        Isoelectric Point: 6.0280

>NTDB_id=967463 ACJX3V_RS19125 WP_004393110.1 3858143..3858937(-) (vicX) [Bacillus amyloliquefaciens strain MEPW12]
MGLQFSVLASGSTGNAFYLETEEHSFLVDAGLSGKAMDGLMERIGRKIDDVDGIFVTHEHSDHIKGLGVIARKYGLPVYA
NEKTWKAMENQIGKLDTGQKFLFPMESVKSFGGLDVESFGVSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFVAGETFQLFDTDPKIPTPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=967463 ACJX3V_RS19125 WP_004393110.1 3858143..3858937(-) (vicX) [Bacillus amyloliquefaciens strain MEPW12]
ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTTTTATCTGGAGACAGAGGAGCATTCTTTTCT
GGTGGATGCCGGCCTGAGCGGTAAAGCGATGGACGGGCTGATGGAGAGAATCGGCCGCAAGATAGATGACGTCGACGGCA
TCTTTGTCACTCACGAGCACAGCGACCATATTAAAGGGCTCGGCGTCATTGCGAGAAAGTACGGTCTACCCGTCTACGCC
AATGAAAAGACGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTTGATACCGGACAAAAGTTTTTGTTCCCGATGGAAAG
CGTAAAATCTTTCGGCGGGCTTGATGTTGAGTCATTCGGCGTCTCTCATGACGCGGCCGAGCCGATGTTTTATGTTTTCC
ACTACCAAGGCAGAAAGCTCGCGCTGATGACGGACACCGGATATGTGAGCGACAGAATGAAAGGCATCATCCGTTCGGCC
AATGTGTTTGTGTTTGAAAGCAACCATGACGTCGGCATGCTGCAAATGGGCAGATACCCTTGGAGCATTAAGCGGCGGAT
TTTAAGCGATGTCGGCCACGTCTCGAATGAAGATGCGGCGCTCGCCATGACTGATGTCATCGGCGACGGCACATCGCGCA
TCTATTTGGCGCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGCAGCAGACATTGGCTGCGAAA
GGATTTGTCGCCGGGGAAACGTTTCAGTTATTTGATACCGATCCGAAAATTCCGACGCCGCTGTGCGCCGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

52.852

99.621

0.527