Detailed information NTG0967456

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACJX3V_RS17465
• Genome accession: NZ_CP176523
• Coordinates: 3526359..3527489 (-)
• Length: 376 a.a.
• NCBI ID: WP_003151195.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain MEPW12
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3521359..3532489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJX3V_RS17430	-	3521853..3522164 (-)	312	WP_025853587.1	hypothetical protein	-
ACJX3V_RS17435	-	3522202..3522606 (-)	405	WP_003151203.1	Rrf2 family transcriptional regulator	-
ACJX3V_RS17440	ureC	3522747..3524456 (-)	1710	WP_088037239.1	urease subunit alpha	-
ACJX3V_RS17445	ureB	3524453..3524827 (-)	375	WP_003151199.1	urease subunit beta	-
ACJX3V_RS17450	ureA	3524824..3525141 (-)	318	WP_003151198.1	urease subunit gamma	-
ACJX3V_RS17455	-	3525495..3525683 (-)	189	WP_003151197.1	CsbD family protein	-
ACJX3V_RS17460	-	3525757..3526236 (-)	480	WP_003151196.1	hypothetical protein	-
ACJX3V_RS17465	rapC	3526359..3527489 (-)	1131	WP_003151195.1	tetratricopeptide repeat protein	Regulator
ACJX3V_RS17470	moaA	3527680..3528705 (-)	1026	WP_048367747.1	GTP 3',8-cyclase MoaA	-
ACJX3V_RS17475	fdhD	3528723..3529511 (-)	789	WP_014306001.1	formate dehydrogenase accessory sulfurtransferase FdhD	-
ACJX3V_RS17480	-	3529606..3529770 (-)	165	WP_003151191.1	hypothetical protein	-
ACJX3V_RS17485	-	3529857..3530537 (-)	681	WP_015387578.1	VWA domain-containing protein	-
ACJX3V_RS17490	-	3530847..3531533 (-)	687	WP_003151188.1	VWA domain-containing protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44932.05 Da
• Isoelectric Point: 5.3221

>NTDB_id=967456 ACJX3V_RS17465 WP_003151195.1 3526359..3527489(-) (rapC) [Bacillus amyloliquefaciens strain MEPW12]
MTAYEIPSSQVGVKINKWYKHILAFQAADAIKLKEEIDEDIQRMEEDQLLLLYYQLISYRHHIMLDYVKPECTEQSQIQY
SELQKTIESTDSISGLSEYYFHLFRGMYEFDHNNYVAAISFYRKAEKLLSFVEDDIERAEFHFKMSEVFYVMKQTHFSMN
HGIQALDTYMKHDFYRVRRIQCHFVISGNYIDCKNYDKALEHLDEALRLSLLEGQPRLIGSSLYNLGNCYAEKRDLDEAA
RYFRKAVPVFEEHQLEQLPKALFSLTHTLFRLHDDQAALTYYERGIMIAKERGDRFSLEKYKFLQALYLESLNMDLIHEV
FDYMNEKSLYVYIEDFALEAAVYTSAHEQYKEAAYFYEKAIRMRENIQKEQCLYDI

Nucleotide

• Length: 1131 bp

>NTDB_id=967456 ACJX3V_RS17465 WP_003151195.1 3526359..3527489(-) (rapC) [Bacillus amyloliquefaciens strain MEPW12]
ATGACCGCATACGAGATTCCGTCATCTCAAGTTGGAGTCAAGATCAACAAATGGTACAAGCACATTTTAGCGTTTCAAGC
GGCTGATGCCATAAAGCTGAAAGAGGAAATTGATGAGGATATACAACGTATGGAGGAAGACCAGCTGCTGCTGTTATATT
ATCAGCTGATCAGCTACCGCCATCATATTATGCTTGATTACGTCAAGCCGGAATGCACCGAACAATCACAGATTCAGTAC
AGCGAGCTGCAAAAGACGATCGAAAGCACGGACAGCATATCGGGACTGTCTGAGTATTATTTCCATTTGTTCAGAGGGAT
GTATGAATTCGATCACAATAACTATGTTGCGGCTATTTCTTTTTACCGGAAAGCGGAAAAACTCCTTTCATTTGTCGAGG
ATGATATAGAGAGGGCGGAATTCCATTTCAAGATGTCTGAAGTGTTTTACGTCATGAAGCAGACTCATTTTTCCATGAAT
CACGGGATTCAGGCGCTGGATACGTATATGAAACACGATTTTTACAGAGTGCGGAGAATTCAATGCCATTTCGTCATTTC
AGGAAACTACATCGACTGCAAAAACTACGACAAAGCGCTTGAGCATTTAGACGAAGCCCTCCGCCTTTCTTTGCTTGAAG
GACAGCCCCGCCTGATCGGGTCTTCGCTTTACAATCTGGGGAATTGTTATGCTGAAAAGCGGGATCTGGATGAAGCGGCC
CGGTACTTTAGAAAAGCGGTTCCCGTTTTTGAAGAGCATCAGCTTGAACAGCTTCCGAAGGCGCTGTTCAGCTTAACGCA
CACCCTTTTCAGGCTGCATGATGACCAAGCGGCCCTCACCTATTATGAAAGAGGGATCATGATCGCGAAAGAACGCGGCG
ACCGATTCAGTTTAGAGAAGTATAAGTTTTTACAAGCGCTTTATTTGGAGTCACTCAATATGGATTTAATCCATGAAGTG
TTTGACTATATGAATGAAAAATCGCTGTATGTGTATATTGAAGATTTCGCCTTGGAGGCCGCCGTTTACACAAGCGCACA
TGAGCAATATAAAGAAGCGGCGTATTTTTATGAAAAAGCGATTCGCATGAGAGAAAACATTCAAAAAGAACAGTGTTTAT
ACGATATATAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Anaphase-promoting complex subunit 5 (ANAPC5) (314-373)

• Tetratricopeptide repeat (TPR_12) (192-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.842	100	0.423
rapF	Bacillus subtilis subsp. subtilis str. 168	40	99.734	0.399