Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY27_RS16530 Genome accession   NZ_CP150239
Coordinates   3295472..3296428 (-) Length   318 a.a.
NCBI ID   WP_339196395.1    Uniprot ID   -
Organism   Solibacillus sp. FSL R5-0449     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3290472..3301428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY27_RS16505 (MKY27_16505) - 3291430..3292023 (-) 594 WP_339196387.1 phosphatase PAP2 family protein -
  MKY27_RS16510 (MKY27_16510) - 3292148..3292480 (-) 333 WP_339196389.1 antibiotic biosynthesis monooxygenase -
  MKY27_RS16515 (MKY27_16515) - 3292544..3293581 (-) 1038 WP_339196391.1 siderophore ABC transporter substrate-binding protein -
  MKY27_RS16520 (MKY27_16520) - 3293765..3294532 (-) 768 WP_008405841.1 ABC transporter ATP-binding protein -
  MKY27_RS16525 (MKY27_16525) - 3294529..3295485 (-) 957 WP_339196393.1 iron chelate uptake ABC transporter family permease subunit -
  MKY27_RS16530 (MKY27_16530) ceuB 3295472..3296428 (-) 957 WP_339196395.1 ABC transporter permease Machinery gene
  MKY27_RS16535 (MKY27_16535) menC 3296706..3297815 (-) 1110 WP_339196396.1 o-succinylbenzoate synthase -
  MKY27_RS16540 (MKY27_16540) - 3297860..3298693 (-) 834 WP_339196397.1 GNAT family N-acetyltransferase -
  MKY27_RS16545 (MKY27_16545) - 3299095..3300579 (-) 1485 WP_339196398.1 peptide MFS transporter -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34806.06 Da        Isoelectric Point: 9.5449

>NTDB_id=967321 MKY27_RS16530 WP_339196395.1 3295472..3296428(-) (ceuB) [Solibacillus sp. FSL R5-0449]
MRLWMLVAATIVLSFLSLFIGAIDIKPSDLLDWESDKMQIFLMSRVPRLMAIILAGAGMGISGLIMQSLSRNKFVSPTTS
GTLDAAKLGIVVSMIFFTSAGYMEKILFSFAFALIGMMIFMRLLESIKFKDVIFVPLIGIMYGNIIGAISTFLAYEADVL
QSVDTFFLGSFTLVVSGRYELLYVAVPAIILAYLYANKFTVAGMGEDFAKNLGLSYRTVLNLGLVLVAIISTTVVLTVGI
IPFLGLIVPNLVSLYMGDNLRKTIPHTIFLGAAFLLMCDILSRLIVYPFEIPVNTTVAVIGSAIFLVMLFRGKAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=967321 MKY27_RS16530 WP_339196395.1 3295472..3296428(-) (ceuB) [Solibacillus sp. FSL R5-0449]
ATGAGACTTTGGATGCTCGTAGCAGCGACCATCGTTCTGTCCTTTTTATCATTATTTATTGGTGCGATCGATATTAAGCC
ATCTGATTTATTAGATTGGGAATCAGATAAAATGCAAATTTTCTTAATGAGTCGAGTACCACGATTGATGGCAATTATAC
TTGCCGGGGCAGGGATGGGTATTTCTGGATTAATTATGCAAAGCTTAAGCCGTAACAAATTCGTATCGCCGACAACGTCC
GGTACACTCGATGCGGCAAAGCTAGGTATTGTTGTATCAATGATATTTTTCACAAGTGCAGGATATATGGAGAAGATTCT
CTTCAGTTTTGCATTTGCACTAATCGGTATGATGATTTTCATGCGTCTACTTGAAAGCATTAAATTCAAGGACGTTATTT
TTGTGCCCCTTATCGGGATTATGTATGGAAATATTATTGGTGCCATTTCAACATTTCTTGCGTACGAGGCCGATGTGCTG
CAAAGTGTGGATACATTCTTCCTAGGGAGTTTTACACTTGTTGTATCAGGCCGCTATGAACTGCTTTATGTAGCAGTCCC
TGCAATTATCCTTGCGTACTTGTATGCCAATAAGTTTACAGTGGCTGGTATGGGGGAAGATTTCGCCAAAAATCTTGGAT
TAAGCTATCGTACCGTATTAAATCTCGGTTTAGTACTGGTAGCGATTATTTCTACAACAGTTGTTTTAACGGTAGGGATT
ATACCTTTCCTGGGATTAATCGTACCGAACCTGGTTTCATTATATATGGGGGACAATTTACGTAAAACAATTCCGCATAC
AATTTTCTTAGGTGCAGCATTCCTGTTAATGTGTGATATTTTAAGTCGTTTAATTGTATACCCGTTTGAAATTCCAGTAA
ACACGACAGTTGCGGTAATCGGCAGTGCGATCTTCTTAGTAATGTTGTTTAGGGGGAAAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.582

99.371

0.513

Multiple sequence alignment